PDBReader Class Reference

#include <pdb_reader.hh>

Data Structures

struct  CompndEntry
struct  HetEntry
struct  HSEntry

Public Member Functions

 PDBReader (const String &filename, const IOProfile &profile)
 PDBReader (const boost::filesystem::path &loc, const IOProfile &profile)
 PDBReader (std::istream &instream, const IOProfile &profile)
bool HasNext ()
void Import (mol::EntityHandle &ent, const String &restrict_chains="")
void SetReadSeqRes (bool flag)
bool GetReadSeqRes () const
seq::SequenceList GetSeqRes () const
 PDBReader (const String &filename, const IOProfile &profile)
 PDBReader (const boost::filesystem::path &loc, const IOProfile &profile)
 PDBReader (std::istream &instream, const IOProfile &profile)
bool HasNext ()
void Import (mol::EntityHandle &ent, const String &restrict_chains="")
void SetReadSeqRes (bool flag)
bool GetReadSeqRes () const
seq::SequenceList GetSeqRes () const

Detailed Description

Definition at line 39 of file pdb_reader.hh.


Constructor & Destructor Documentation

PDBReader ( const String filename,
const IOProfile profile 
)
PDBReader ( const boost::filesystem::path &  loc,
const IOProfile profile 
)
PDBReader ( std::istream &  instream,
const IOProfile profile 
)
PDBReader ( const String filename,
const IOProfile profile 
)
PDBReader ( const boost::filesystem::path &  loc,
const IOProfile profile 
)
PDBReader ( std::istream &  instream,
const IOProfile profile 
)

Member Function Documentation

bool GetReadSeqRes (  )  const [inline]

Definition at line 68 of file pdb_reader.hh.

bool GetReadSeqRes (  )  const [inline]

Definition at line 68 of file pdb_reader.hh.

seq::SequenceList GetSeqRes (  )  const [inline]

Definition at line 70 of file pdb_reader.hh.

seq::SequenceList GetSeqRes (  )  const [inline]

Definition at line 70 of file pdb_reader.hh.

bool HasNext (  ) 
bool HasNext (  ) 
void Import ( mol::EntityHandle ent,
const String restrict_chains = "" 
)
void Import ( mol::EntityHandle ent,
const String restrict_chains = "" 
)
void SetReadSeqRes ( bool  flag  )  [inline]

Definition at line 67 of file pdb_reader.hh.

void SetReadSeqRes ( bool  flag  )  [inline]

Definition at line 67 of file pdb_reader.hh.


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