- g -
- GaussianFilterBase()
: GaussianFilterBase
- GaussianGradientMagnitudeFilterBase()
: GaussianGradientMagnitudeFilterBase
- GaussianHighPassFilter()
: GaussianHighPassFilter
- GaussianLaplacianFilterBase()
: GaussianLaplacianFilterBase
- GaussianLowPassFilter()
: GaussianLowPassFilter
- GaussianSmooth()
: Table
- Generate()
: IsosurfaceGenerator
, IsosurfaceGeneratorS
, Spline
- GenerateDisulfidBonds()
: Modeller
- GenericProp()
: GenericPropContainerImpl
- GenericPropContainerImpl()
: GenericPropContainerImpl
- GenericPropError()
: GenericPropError
- GenProp()
: GenProp
- GeomException()
: GeomException
- Get()
: Dist2Mean
, TriMatrix< T >
, RemoteRepository
- get()
: AdjacencyBitmap
- Get()
: IOProfileRegistry
, EntityPropertyMapper
- get_block_edit_mode_()
: PythonShellWidget
- get_intercept_x_values_()
: PolygonMask
- GetA()
: Ellipse2
, Hyperbola2
, ButterworthLowPassFilter
- GetAALines()
: GfxObj
, LineRenderOptions
- GetAbsoluteOrigin()
: ImageHandle
, ConstImageHandle
, ImageStateBase
, ImageStateImpl< T, D >
- GetActions()
: FileBrowser
, MessageWidget
, SequenceViewer
, Widget
- GetActiveNode()
: SceneSelection
- GetActiveNodeCount()
: SceneSelection
- GetActiveOverlay()
: OverlayManager
- GetActiveTool()
: ToolManager
- GetActiveView()
: SceneSelection
- GetActiveViewCount()
: SceneSelection
- GetAddRuleAnchors()
: GromacsBlockModifier
- GetAddRuleCharge()
: GromacsBlockModifier
- GetAddRuleMethod()
: GromacsBlockModifier
- GetAddRuleNames()
: GromacsBlockModifier
- GetAddRuleNumber()
: GromacsBlockModifier
- GetAddRuleType()
: GromacsBlockModifier
- GetAdjMap()
: Domains
- GetAdjustedClashingDistance()
: ClashingDistances
- GetAdjustedReferenceDistance()
: ClashEvent
- GetAlgorithmName()
: MirrorFnc
, ShiftFnc
, TransformFnc
, AutoCorrelateFnc
, ConjFnc
, ExplicitConvoluteFnc
, ExplicitCorrelateFnc
, SliceFnc
, DiscreteShrinkFnc
, FFTFnc
, GaussianFilterBase
, GaussianGradientMagnitudeFilterBase
, GaussianLaplacianFilterBase
, HighestPeakSearch3DBase
, HistogramBase
, LineAverageBase
, LocalSigmaThresholdBase
, MaskImageBase
, PowerSpectrumFnc
, RandomizeFnc
, SmoothMaskImageBase
, StatBase
, StatMinMaxBase
, CosFnc
, ExpFnc
, LogFnc
, Log10Fnc
, SinFnc
, SqrtFnc
, TanFnc
, PowFnc
, NormalizeFnc
, PasteFnc
- GetAlignedSeq()
: MMCifInfoStructRef
- GetAlignedSeqs()
: MMCifInfoStructRef
- GetAlignment()
: AlignmentViewObject
, QSscoreEntity
- GetAlignmentForRow()
: SequenceModel
- GetAlignmentHandle()
: AlignedRegion
- GetAllowedRange()
: StereoChemicalBondViolation
, StereoChemicalAngleViolation
- GetAlpha()
: Color
- GetAlphaHelixContent()
: CoordFrame
- GetAltAtomBFactor()
: ResidueImpl
- GetAltAtomGroupNames()
: ResidueImpl
, ResidueHandle
- GetAltAtomOcc()
: ResidueImpl
- GetAltAtomPos()
: ResidueImpl
, ResidueHandle
- GetAltBFactor()
: AtomBase
- GetAltGroupNames()
: AtomBase
- GetAltOcc()
: AtomBase
- GetAltPos()
: AtomBase
- GetAmbientOcclusion()
: Scene
- GetAmbientOcclusionMode()
: Scene
- GetAmbientOcclusionQuality()
: Scene
- GetAmbientOcclusionSize()
: Scene
- GetAmbientOcclusionWeight()
: Scene
- GetAngle()
: Quat
, CoordFrame
, EntityHandle
, EntityView
, EntityImpl
, TorsionImpl
, Forcefield
, TorsionHandle
- GetAngleCount()
: StereoChemistryInfo
- GetAngleICS()
: Dihedral
, EntityImpl
- GetAngles()
: BuildingBlock
, GromacsBlockModifier
, QSscoreEntity
- GetAngleViolationList()
: StereoChemistryInfo
- GetAngleWidth()
: StereoChemicalAngleViolation
- GetAngleXCS()
: Dihedral
, EntityImpl
- GetAnisou()
: AtomBase
, AtomImpl
- GetAntialiasing()
: DataViewerPanelBase
- GetArcDetail()
: PrimList
, CartoonRenderOptions
, CustomRenderOptions
, TraceRenderOptions
- GetArea()
: Rectangle2
, Polygon2
, Ellipse2
, Circle2
- GetAspect()
: Scene
- GetAssignTorsions()
: Processor
- GetAtom()
: Diag
, FragmentImpl
- GetAtomCount()
: ChainHandle
, ChainView
, CoordGroupHandle
, CoordSource
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetAtomList()
: ChainHandle
, CoordGroupHandle
, CoordSource
, EntityHandle
, EntityView
, ResidueImpl
, ResidueHandle
, ResidueView
- GetAtomName()
: UniqueAtomIdentifier
- GetAtomPos()
: CoordFrame
, CoordGroupHandle
, CoordSource
- GetAtomPosList()
: EntityHandle
- GetAtomProps()
: SelNode
- GetAtomRenaming()
: Forcefield
- GetAtomRenamingRules()
: Forcefield
- GetAtoms()
: Measurement
, BuildingBlock
, Interaction
, NotConnectedError
- GetAtomSpecIndex()
: Compound
- GetAtomSpecs()
: Compound
- GetAtomType()
: Forcefield
- GetAttachedView()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetAttribute()
: InfoGroup
, InfoHandle
, EleImpl
, InfoItem
- GetAttributeList()
: InfoGroup
, InfoHandle
, EleImpl
, InfoItem
- GetAuthorList()
: MMCifInfoCitation
- GetAutoAutoslab()
: Scene
- GetAutoslabMode()
: Scene
- GetAvailableAlignmentHandler()
: IOManager
- GetAvailableEntityHandler()
: IOManager
- GetAvailableProfileHandler()
: IOManager
- GetAvailableSurfaceHandler()
: IOManager
- GetAvailableWidgets()
: PanelManager
, WidgetPool
- GetAvailableWidgetsMenu()
: PanelManager
- GetAverage()
: Distances
- GetAverageBFactor()
: ResidueImpl
- GetAverageEntropy()
: ProfileHandle
- GetAverageOffset()
: ClashingInfo
- GetAverageScore()
: ProfileHandle
- GetAvgBondLengthInfo()
: StereoChemistryInfo
- GetAvgLength()
: BondLengthInfo
- GetAvgZscore()
: BondLengthInfo
- GetAvgZscoreAngles()
: StereoChemistryInfo
- GetAvgZscoreBonds()
: StereoChemistryInfo
- GetAxis()
: Quat
, QSscoreEntity
- GetAxisA()
: Cuboid
- GetAxisB()
: Cuboid
- GetAxisC()
: Cuboid
- GetB()
: Ellipse2
, Hyperbola2
- GetBackground()
: Scene
- GetBackgroundStereoMode()
: Scene
- GetBackgroundStereoOffset()
: Scene
- GetBadAngleCount()
: StereoChemistryInfo
- GetBadBondCount()
: StereoChemistryInfo
- GetBasedir()
: MMPreprocessor
- GetBFactor()
: AtomBase
, AtomImpl
- GetBins()
: HistogramBase
- GetBioUnits()
: MMCifInfo
- GetBitDepth()
: MRC
, TIF
, DAT
, IPL
, MRC
, TIF
, DAT
, IPL
- GetBlockModifier()
: Forcefield
- GetBlockModifierType()
: HydrogenConstructor
, TerminiConstructor
, BlockModifier
, GromacsHydrogenConstructor
, GromacsBlockModifier
, HeuristicHydrogenConstructor
, HeuristicBlockModifier
- GetBlocksize()
: DiscreteShrinkFnc
- GetBlue()
: Color
- GetBlurFactors()
: SimpleRenderOptions
- GetBlurFlag()
: SimpleRenderOptions
- getBody()
: DensityForce
- GetBond()
: Forcefield
- GetBondCount()
: StereoChemistryInfo
, AtomHandle
, AtomView
, ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
- GetBondEntryList()
: LineTraceRenderer
, SimpleRenderer
- GetBondLength()
: StereoChemicalBondViolation
- GetBondList()
: AtomHandle
, AtomView
, EntityHandle
, EntityView
, EntityImpl
- GetBondOrder()
: BondHandle
, ConnectorImpl
- GetBondOrderDistance()
: SimpleRenderOptions
- GetBondOrderFlag()
: SimpleRenderOptions
- GetBondPartners()
: AtomHandle
, AtomView
- GetBondRad()
: CustomRenderOptions
- GetBonds()
: BuildingBlock
, GromacsBlockModifier
- GetBondSpecs()
: Compound
- GetBondViolationList()
: StereoChemistryInfo
- GetBoolProp()
: ConstGenericPropContainer< H >
- GetBoolRepr()
: EleImpl
- GetBoundingBox()
: Polygon2
, Ellipse2
, Entity
, GfxObj
, GfxTestObj
, CartoonRenderer
, ConnectRendererBase
, EntityRenderer
, TraceRendererBase
, MapIso
, MapSlab
, PrimList
, Scene
, Surface
, IndexedVertexArray
- GetBoundObject()
: QueryState
- GetBounds()
: ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetBrush()
: SymbolDrawingStrategy
- GetBuildingBlock()
: Forcefield
- GetBuildingBlockNames()
: Forcefield
- GetButtonGroup()
: DataViewer
, OverlayManagerGUI
- GetButtons()
: MouseEvent
- GetCalculateMinMax()
: GradientColorOp
- GetCarbonsOnly()
: ColorOptionsWidget
- GetCAS()
: MMCifInfoCitation
- GetCASPFlag()
: MMCifInfoStructDetails
- GetCategory()
: StarDataItem
, StarLoopDesc
, StarDataItem
, StarLoopDesc
- GetCellAngles()
: CoordFrame
- GetCellSize()
: BaseRow
, CoordFrame
- GetCellVectors()
: CoordFrame
- GetCenter()
: AlignedCuboid
, Circle2
, Cuboid
, PointCloud
, Transform
, Vec3List
, GfxObj
, GfxObjBase
, GfxTestObj
, MapIso
, MapSlab
, PrimList
, Scene
, Extent
, WithinParam
- GetCenterOfAtoms()
: ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetCenterOfMass()
: StatBase
, ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetCenterOfMassPos()
: CoordFrame
- GetCentralAtom()
: ResidueImpl
, ResidueBase
- GetCentralNormal()
: ResidueImpl
, ResidueBase
- GetCentroid()
: Polygon2
- GetChain()
: Diag
, SecStrRow
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetChainCount()
: ByChainColorOp
, EntityHandle
, EntityView
, EntityImpl
- GetChainIntervalList()
: MMCifInfoBioUnit
- GetChainIter()
: EntityImpl
- GetChainList()
: MMCifInfoBioUnit
, EntityHandle
, EntityView
, EntityImpl
- GetChainName()
: MMCifInfoStructRefSeq
, UniqueAtomIdentifier
- GetChainView1()
: _CachedRMSD
- GetChainView2()
: _CachedRMSD
- GetCharge()
: AtomBase
, AtomImpl
, BuildingBlock
, Topology
- GetCharges()
: BuildingBlock
, Topology
- GetCheckBondFeasibility()
: Processor
- GetCheckedValue()
: ImageStateImpl< T, D >
- GetChemClass()
: Compound
, ResidueImpl
, ResidueBase
- GetChemType()
: Compound
, ResidueImpl
, ResidueBase
- GetChild()
: SceneNode
- GetChildCount()
: GfxNode
, OctreeNode
- GetChildren()
: GfxNode
- GetChildRow()
: SceneNode
- GetCircumference()
: Circle2
- GetCitations()
: MMCifInfo
- GetClamp()
: GradientColorOp
- GetClashCount()
: ClashingInfo
- GetClashingDistance()
: ClashingDistances
- GetClashList()
: ClashingInfo
- GetClickedPosition()
: DataViewerPanelBase
- GetClip()
: GfxObj
, GfxObjBase
- GetClipOffset()
: GfxObj
, GfxObjBase
, IndexedVertexArray
- GetClipPlane()
: GfxObj
, GfxObjBase
- GetCMap()
: Forcefield
- GetCMapIndices()
: Topology
- GetCMapParameters()
: Topology
- GetCMaps()
: BuildingBlock
, Topology
- GetCmaps()
: GromacsBlockModifier
- GetCodeBlockStatus()
: PythonInterpreter
- GetCodeLogging()
: TextLogger
- GetCol()
: Mat3
- GetColIndex()
: Table
- GetColNames()
: Table
- GetColor()
: ByChainColorOp
, UniformColorOp
, Gradient::Stop
, MapIso
, IndexedVertexArray
, Measurement
, MeasureTool
, ColorSelectWidget
- GetColorAt()
: Gradient
- GetColorBlendMode()
: CartoonRenderOptions
- GetColorMode()
: DataViewerPanelBase
- GetColumnCount()
: EntityPartNode
, GfxSceneNode
, LabelNode
, RenderModeNode
, RootNode
, SceneNode
, BaseRow
, SequenceRow
- GetColumns()
: ProfileHandle
- GetCommand()
: InputEvent
, PythonContextParser
, PythonShellWidget
, ShellHistory
- GetCommandMode()
: ShellHistory
- GetComment()
: InfoGroup
, EleImpl
, InfoItem
- GetCommonMatch()
: OstCompleterBase
- GetComplex()
: ConstData
, ImageHandle
, ConstImageHandle
, ImageStateBase
, FrequencyDomain
, HalfFrequencyDomain
, ImageStateImpl< T, D >
, SpatialDomain
, NullData
- GetComponents()
: Domains
- GetCompOP()
: SelNode
- GetConnect()
: Processor
- GetConnectAminoAcids()
: Processor
- GetConnectorCount()
: AtomImpl
- GetConstraint()
: Forcefield
- GetConstraints()
: BuildingBlock
- GetContextAtLocation()
: PythonContext
, PythonContextParser
- GetContextMenu()
: SceneWin
- GetCount()
: AlignmentHandle
, SequenceListImpl
, ConstSequenceList
, SequenceList
, BondLengthInfo
- GetCoverage()
: AlignmentHandle
, SequenceListImpl
- GetCreationDate()
: Compound
, CompoundLib
- GetCrosshair()
: PointlistOverlayBase
- GetCTerModifier()
: Forcefield
- GetCurrentAltGroupName()
: ResidueImpl
, ResidueHandle
- GetCurrentDisplayMode()
: BaseViewObject
, SequenceModel
, SequenceViewer
- GetCurrentLinenum()
: StarParser
- GetCurrentName()
: Shader
- GetCurrentProgram()
: Shader
- GetCurrentSink()
: Logger
- GetCurrentWidget()
: ComboOptionsWidget
- GetCustomViewNode()
: EntityNode
- GetData()
: DataViewer
, EntityPartNode
, GfxSceneNode
, LabelNode
, RenderModeNode
, RootNode
, SceneNode
, AlignmentViewObject
, BaseRow
, BaseViewObject
, SecStrRow
, SequenceRow
, TitleRow
, ValueHolder< V >
- GetDataElement()
: Distances
- GetDataMax()
: DataViewerPanelBase
- GetDataMin()
: DataViewerPanelBase
- GetDataPtr()
: RasterImage
- GetDataSize()
: Distances
- GetDataType()
: ValueHolder< V >
- GetDate()
: MMCifInfoObsolete
, MMCifInfoRevisions
, MMCifInfoObsolete
, MMCifInfoRevisions
- GetDateOriginal()
: MMCifInfoRevisions
- GetDBAccess()
: MMCifInfoStructRef
- GetDBBegin()
: MMCifInfoStructRefSeq
- GetDBEnd()
: MMCifInfoStructRefSeq
- GetDBID()
: MMCifInfoStructRef
- GetDBName()
: MMCifInfoStructRef
- GetDBRNum()
: MMCifInfoStructRefSeqDif
- GetDefault()
: ToolOptionNum< T, C >
, IOProfileRegistry
- GetDefaultGroup()
: InfoHandle
- GetDefaultItem()
: InfoHandle
- GetDefaultLib()
: Conopology
- getDefaultParameters()
: DensityForceImpl
- GetDefaultProps()
: AtomProp
- GetDefaultQueryFlags()
: EntityHandle
, EntityImpl
- GetDefaultSize()
: GostyMainWindow
, SequenceDelegate
- GetDefaultTextSize()
: Scene
- GetDeleteAtoms()
: GromacsBlockModifier
- GetDeletions()
: InsDel
- GetDelim()
: PythonTokenizer
- GetDelta()
: InputEvent
, MouseEvent
, CoordGroupHandle
- getDensity()
: DensityForce
- GetDensity()
: Topology
- GetDensityBodies()
: Topology
- GetDensityResolution()
: Topology
- GetDensityScaling()
: Topology
- GetDepth()
: Extent
, Size
- GetDescription()
: ChainBase
, ChainImpl
- GetDescriptor()
: MMCifInfoStructDetails
- GetDetails()
: MMCifInfoBioUnit
, MMCifInfoStructRefSeqDif
, MMCifInfoBioUnit
, MMCifInfoStructRefSeqDif
- GetDevice()
: InputEvent
- GetDialect()
: Compound
- GetDialectAsString()
: Compound
- GetDifs()
: MMCifInfoStructRefSeq
- GetDihedralAngle()
: CoordFrame
- GetDihedrals()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- GetDim()
: Extent
, Size
- GetDir()
: ConnectorImpl
- GetDirection()
: Line2
, Line3
- GetDisplayAlignment()
: SelectRefDialog
- GetDisplayModes()
: BaseViewObject
, SequenceModel
, SequenceViewer
- GetDisplayPixelValues()
: DataViewerPanelBase
- GetDistanceBetwAtoms()
: CoordFrame
- GetDistanceBetwCenterOfMass()
: CoordFrame
- GetDistanceConstraintIndex()
: Topology
- GetDistanceConstraintIndices()
: Topology
- GetDistanceConstraintParameters()
: Topology
- GetDistanceConstraints()
: Topology
- GetDistances()
: DistanceMap
- GetDocument()
: InfoImpl
- GetDOI()
: MMCifInfoCitation
- GetDomain()
: ConstData
, ImageHandle
, ConstImageHandle
, ImageStateBase
, FrequencyDomain
, HalfFrequencyDomain
, ImageStateImpl< T, D >
, SpatialDomain
, NullData
- GetDomains()
: Domains
- GetDownsampledMap()
: MapIso
- GetEditStartBlock()
: PythonShellWidget
- GetEffectiveView()
: EntityRenderer
- GetElement()
: EleImpl
, AtomBase
, AtomImpl
- GetEnd()
: Rectangle2
, Extent
, ExtentIterator
, ValueHolder< V >
, AlignedRegion
- GetEndianess()
: DAT
- GetEndianessOnSave()
: MRC
, Spider
, MRC
, Spider
- GetEnergy()
: Simulation
- GetEntities()
: SelectRefDialog
- GetEntity()
: Entity
, EntityPartNode
, AtomHandle
, AtomView
, ChainHandle
, ChainView
, CoordGroupHandle
, CoordSource
, EditorBase
, AtomImpl
, ChainImpl
, ResidueImpl
, Simulation
, QueryViewWrapper
, ResidueHandle
, ResidueView
- GetEntityHandler()
: FileTypeDialog
- GetEntityID()
: MMCifInfoStructRef
- GetEntityOfViews()
: SceneWinModel
- GetEntityView()
: EntityViewColorOp
, QueryViewWrapper
- GetEntries()
: IndexedVertexArray
- GetEntropy()
: ProfileColumn
- GetEntryID()
: MMCifInfoStructDetails
- GetEps()
: ButterworthLowPassFilter
- GetEpsilon()
: Topology
- GetEpsilons()
: Topology
- GetErrorDescription()
: QueryImpl
, Query
- GetErrorLogging()
: TextLogger
- GetException()
: TerminiExceptions
- GetExclusions()
: BuildingBlock
, Topology
- GetExportAspect()
: Scene
- GetExtent()
: CuboidAxis
, DataViewerPanelBase
, ConstData
, ExtentIterator
, ImageHandle
, ConstImageHandle
, ImageStateBase
, FrequencyDomain
, HalfFrequencyDomain
, ImageStateImpl< T, D >
, SpatialDomain
, NullData
- GetFar()
: Scene
- GetFastHighMagnificationDrawing()
: DataViewerPanelBase
- GetFastLowMagnificationDrawing()
: DataViewerPanelBase
- GetFFTSize()
: FFTPanel
- GetFGMDHBondAcceptorIndices()
: Topology
- GetFGMDHBondAcceptorParameters()
: Topology
- GetFGMDHBondAcceptors()
: Topology
- GetFGMDHBondDonorIndices()
: Topology
- GetFGMDHBondDonorParameters()
: Topology
- GetFGMDHBondDonors()
: Topology
- GetFibonacciX()
: DSSPAccessibilityParam
- GetFibonacciY()
: DSSPAccessibilityParam
- GetFibonacciZ()
: DSSPAccessibilityParam
- GetFillColor()
: Primitive
- GetFirst()
: BondHandle
, ConnectorImpl
, Dihedral
, TorsionHandle
- GetFirstAtom()
: ClashEvent
, StereoChemicalBondViolation
, StereoChemicalAngleViolation
- GetFirstChild()
: OctreeNode
- GetFirstNonGap()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetFirstRelease()
: MMCifInfoRevisions
- GetFixCenter()
: Scene
- GetFixedPickRadius()
: ConnectRendererBase
- GetFixElement()
: RuleBasedProcessor
- GetFlags()
: QueryViewWrapper
- GetFloatProp()
: ConstGenericPropContainer< H >
- GetFloatProperty()
: AtomBase
, AtomImpl
, ResidueImpl
, ResidueBase
- GetFloatRepr()
: EleImpl
- GetFog()
: Scene
- GetFogColor()
: Scene
- GetFogFarOffset()
: Scene
- GetFogNearOffset()
: Scene
- GetFont()
: BaseRow
- GetFontSize()
: BaseRow
- GetForcefield()
: FFReader
- GetForces()
: Simulation
- GetFormat()
: IndexedVertexArray
, TIF
- GetFormatDescription()
: ClustalIOHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOMMCIFHandler
, EntityIOPDBHandler
, EntityIOPQRHandler
, EntityIOSDFHandler
, FastaIOHandler
, HhmIOHandler
, MapIODatHandler
, DF3MapIOHandler
, MapIODm3Handler
, MapIODxHandler
, MapIOHandlerFactoryBase
, MapIOIPLHandler
, MapIOJpkHandler
, MapIOMrcHandler
, MapIONanoscopeHandler
, MapIOPngHandler
, MapIOSitusHandler
, MapIOSpiHandler
, MapIOTiffHandler
, MapIODatHandler
, DF3MapIOHandler
, MapIODm3Handler
, MapIODxHandler
, MapIOHandlerFactoryBase
, MapIOIPLHandler
, MapIOJpkHandler
, MapIOMrcHandler
, MapIONanoscopeHandler
, MapIOPngHandler
, MapIOSitusHandler
, MapIOSpiHandler
, MapIOTiffHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOMMCIFHandler
, EntityIOPDBHandler
, EntityIOPQRHandler
, EntityIOSDFHandler
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
, PirIOHandler
, ProfileIOHandlerFactoryBase
, PromodIOHandler
, PssmIOHandler
, ClustalIOHandler
, FastaIOHandler
, HhmIOHandler
, PirIOHandler
, ProfileIOHandlerFactoryBase
, PromodIOHandler
, PssmIOHandler
, SequenceIOHandlerFactoryBase
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
- GetFormatName()
: ClustalIOHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOMMCIFHandler
, EntityIOPDBHandler
, EntityIOPQRHandler
, EntityIOSDFHandler
, FastaIOHandler
, HhmIOHandler
, MapIODatHandler
, DF3MapIOHandler
, MapIODm3Handler
, MapIODxHandler
, MapIOHandlerFactoryBase
, MapIOIPLHandler
, MapIOJpkHandler
, MapIOMrcHandler
, MapIONanoscopeHandler
, MapIOPngHandler
, MapIOSitusHandler
, MapIOSpiHandler
, MapIOTiffHandler
, MapIODatHandler
, DF3MapIOHandler
, MapIODm3Handler
, MapIODxHandler
, MapIOHandlerFactoryBase
, MapIOIPLHandler
, MapIOJpkHandler
, MapIOMrcHandler
, MapIONanoscopeHandler
, MapIOPngHandler
, MapIOSitusHandler
, MapIOSpiHandler
, MapIOTiffHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOMMCIFHandler
, EntityIOPDBHandler
, EntityIOPQRHandler
, EntityIOSDFHandler
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
, PirIOHandler
, ProfileIOHandlerFactoryBase
, PromodIOHandler
, PssmIOHandler
, ClustalIOHandler
, FastaIOHandler
, HhmIOHandler
, PirIOHandler
, ProfileIOHandlerFactoryBase
, PromodIOHandler
, PssmIOHandler
, SequenceIOHandlerFactoryBase
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
- GetFormatString()
: ImageFormatBase
- GetFormattedMessage()
: QueryError
- GetFormula()
: Compound
- GetFourth()
: Dihedral
, TorsionHandle
- GetFOV()
: Scene
- GetFrame()
: CoordGroupHandle
, CoordSource
, InMemCoordSource
- GetFrame2()
: CoordGroupHandle
- GetFrameCount()
: CoordGroupHandle
, CoordSource
, InMemCoordSource
- GetFrameDelta()
: CoordSource
- GetFramePositions()
: CoordGroupHandle
- GetFreeD()
: Domains
- GetFreeS()
: Domains
- GetFreq()
: ProfileColumn
- GetFrequencySampling()
: ConstData
, PixelSampling
- GetFudgeLJ()
: Forcefield
, Topology
- GetFudgeQQ()
: Forcefield
, Topology
- GetFullName()
: WidgetFactory
, WidgetRegistry
- GetFullView()
: EntityRenderer
- GetFuncType()
: Interaction
- GetGallery()
: ImageList
- GetGamma()
: Ellipse2
, Hyperbola2
, DataViewer
, DataViewerPanelBase
, ViewerNormalizer
- GetGaplessString()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetGBSARadii()
: Topology
- GetGBSARadius()
: Topology
- GetGeometry()
: LineAverageBase
- GetGfxColor()
: ColorSelectWidget
- GetGfxGradient()
: GradientEdit
, ImmutableGradientInfoHandler
- GetGfxNode()
: GfxSceneNode
, RenderModesNode
- GetGfxNodes()
: SceneWinModel
- GetGfxObject()
: SequenceViewObject
- GetGlobalRow()
: SequenceModel
- GetGlobalScore()
: lDDTScorer
- GetGLWin()
: GostyApp
- GetGradient()
: BasicGradientColorOp
, GradientColorOp
, GradientManager
, GradientEdit
, GradientListModel
- GetGradientNames()
: GradientManager
- GetGreen()
: Color
- GetGroup()
: InfoGroup
, InfoHandle
- GetGroups()
: ToolOptions
, InfoGroup
- GetGutterBlocks()
: PythonShellWidget
- GetHalf()
: Size
- GetHalfExtent()
: CuboidAxis
- GetHalfExtents()
: Cuboid
- GetHandle()
: Surface
, AtomHandle
, AtomView
, ChainHandle
, ChainView
, EntityHandle
, EntityView
, ResidueHandle
, ResidueView
- GetHarmonicAngleIndices()
: Topology
- GetHarmonicAngleParameters()
: Topology
- GetHarmonicAngles()
: Topology
- GetHarmonicBondIndices()
: Topology
- GetHarmonicBondParameters()
: Topology
- GetHarmonicBonds()
: Topology
- GetHarmonicDistanceRestraintIndices()
: Topology
- GetHarmonicDistanceRestraintParameters()
: Topology
- GetHarmonicDistanceRestraints()
: Topology
- GetHarmonicImproperIndices()
: Topology
- GetHarmonicImproperParameters()
: Topology
- GetHarmonicImpropers()
: Topology
- GetHarmonicPositionRestraintIndices()
: Topology
- GetHarmonicPositionRestraintParameters()
: Topology
- GetHarmonicPositionRestraints()
: Topology
- GetHashCode()
: AtomHandle
, AtomView
, BondHandle
, ResidueHandle
- GetHeader()
: lDDTLocalScore
- GetHeight()
: Rectangle2
, Extent
, RasterImage
, Size
- GetHelixEcc()
: CartoonRenderOptions
- GetHelixMode()
: CartoonRenderOptions
- GetHelixProfileType()
: CartoonRenderOptions
- GetHelixThickness()
: CartoonRenderOptions
- GetHelixWidth()
: CartoonRenderOptions
- GetHemiParams()
: Scene
- GetHistogram()
: MapIso
- GetHistogramBinCount()
: MapIso
- GetHSV()
: Color
- GetHSVA()
: Color
- GetHSVMode()
: Gradient
- GetHue()
: Color
- GetHydrogenConstructor()
: Forcefield
- GetHydrogenRuleAnchors()
: GromacsHydrogenConstructor
- GetHydrogenRuleMethod()
: GromacsHydrogenConstructor
- GetHydrogenRuleNames()
: GromacsHydrogenConstructor
- GetHydrogenRuleNumber()
: GromacsHydrogenConstructor
- GetHydrogens()
: Checker
- GetIcon()
: GradientListModel
, PresetListModel
, MessageWidget
, Manipulator
, MapTool
, MeasureTool
, SelectionTool
, Tool
- GetID()
: Compound
, MMCifInfoTransOp
, MMCifInfoBioUnit
, MMCifInfoCitation
, MMCifInfoObsolete
, MMCifInfoStructRef
, MMCifInfoStructRefSeq
, MMCifInfoTransOp
, MMCifInfoBioUnit
, MMCifInfoCitation
, MMCifInfoObsolete
, MMCifInfoStructRef
, MMCifInfoStructRefSeq
- GetIDList()
: OverlayManager
- GetImageStack()
: ImageList
- GetImpl()
: ConstGenericPropContainer< H >
- GetImplementation()
: Normalizer
- GetImplicitGenborn()
: Forcefield
- GetImpropers()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- GetInchi()
: Compound
- GetInchiKey()
: Compound
- GetIndex()
: InputEvent
, PanelBar
, ToolOptionEnum
, StarLoopDesc
, AtomBase
, AtomImpl
, ChainImpl
, ResidueImpl
, ResidueHandle
, ResidueView
, AlignedColumn
, SequenceImpl
, ProfileColumn
, ConstSequenceHandle
, SequenceHandle
- GetIndexesForSubject()
: SequenceViewObject
- GetIndexesForView()
: SequenceViewObject
- GetIndexForResNum()
: ChainImpl
- GetIndexOf()
: SceneWinModel
- GetInertia()
: Vec3List
- GetInfo()
: MMCifReader
- GetInsCode()
: ResNum
- GetInsertions()
: InsDel
- GetInstance()
: NACCESSAccessibilityParam
, DSSPAccessibilityParam
- GetInternalWidget()
: Widget
- GetIntpolComplex()
: ConstData
, ImageHandle
, ConstImageHandle
, ImageStateBase
, ImageStateImpl< T, D >
, NullData
- GetIntpolReal()
: ConstData
, ImageHandle
, ConstImageHandle
, ImageStateBase
, ImageStateImpl< T, D >
, NullData
- GetIntProp()
: ConstGenericPropContainer< H >
- GetIntProperty()
: AtomBase
, AtomImpl
, ResidueImpl
, ResidueBase
- GetIntRepr()
: EleImpl
- GetInvert()
: DataViewer
, DataViewerPanelBase
, ViewerNormalizer
- GetInvertedMatrix()
: Transform
- GetInvertedProjection()
: Scene
- GetInvTransformationMatrix()
: EntityHandle
- GetISBN()
: MMCifInfoCitation
- GetItem()
: InfoHandle
, SceneWinModel
, InfoGroup
- GetItems()
: InfoGroup
- GetIterator()
: ImageHandle
, ConstImageHandle
- GetJsonString()
: VarianceMap
, Dist2Mean
- getKernelNames()
: DensityForceImpl
- GetKey()
: EdgeDesc
, ToolOption
, ToolOptionGroup
, ResidueImpl
, ResidueBase
- GetKeywordIndex()
: GromacsData
, CHARMMData
- GetKineticEnergy()
: Simulation
- GetKurtosis()
: StatAccumulator< MAX_MOMENT, DATATYPE >
, StatBase
- GetLastDate()
: MMCifInfoRevisions
- GetLastNonGap()
: ConstSequenceHandle
, SequenceImpl
, SequenceHandle
- GetLastPos()
: MouseEvent
- GetLastRow()
: GradientListModel
, PresetEditorListModel
, PresetListModel
- GetLength()
: SequenceHandle
, AlignedRegion
, BondHandle
, ConnectorImpl
, AlignmentHandle
, SequenceImpl
, ConstSequenceHandle
- GetLevel()
: LevelPreview
, BasicGradientColorOp
, GradientLevelColorOp
, MapIso
- GetLHS()
: LogicOPNode
- GetLightDir()
: Scene
- GetLightRot()
: Scene
- GetLimit()
: FermiLowPassFilter
, LowPassFilter
, HighPassFilter
, GaussianLowPassFilter
, GaussianHighPassFilter
, FermiHighPassFilter
, ButterworthLowPassFilter
- GetLine()
: LineIterator
- GetLineHalo()
: GfxObj
- GetLineIndices()
: IndexedVertexArray
- GetLineWidth()
: LineRenderOptions
, GfxObj
, Primitive
, Measurement
, MeasureTool
- GetList()
: BackboneTrace
, InfoPath
- GetListCount()
: BackboneTrace
- GetListSize()
: Observable
- GetLJ()
: Forcefield
- GetLJPairIndex()
: Topology
- GetLJPairIndices()
: Topology
- GetLJPairParameters()
: Topology
- GetLJPairs()
: Topology
- GetLocalRot()
: ConnectorImpl
- GetLocalScores()
: lDDTScorer
- GetLog()
: StringLogSink
- GetLogicalExtent()
: ImageStateBase
, FrequencyDomain
, HalfFrequencyDomain
, ImageStateImpl< T, D >
, SpatialDomain
- GetLowerLimit()
: ToolOptionNum< T, C >
- GetMainArea()
: Perspective
- GetMainModule()
: PythonInterpreter
- GetMainNamespace()
: PythonInterpreter
- GetMap()
: MapIso
- GetMapHandle()
: MapHandleColorOp
- GetMappedRMSD()
: _CachedRMSD
- GetMask()
: ColorOp
, MaskOverlay
- GetMass()
: MMCifInfoStructDetails
, ChainImpl
, MMCifInfoStructDetails
, AtomBase
, ChainHandle
, ChainView
, EntityHandle
, EntityView
, AtomImpl
, EntityImpl
, ResidueImpl
, BuildingBlock
, Topology
, ResidueHandle
, ResidueView
, Forcefield
- GetMasses()
: BuildingBlock
, Topology
- GetMassMethod()
: MMCifInfoStructDetails
- GetMaster()
: AlignedRegion
- GetMatchingBackboneViews()
: AlignmentHandle
- GetMaterial()
: GfxObj
- GetMatrix()
: Transform
, MMCifInfoTransOp
- GetMax()
: AlignedCuboid
, OctreeNode
, Distances
- GetMaxAdjustedDistance()
: ClashingDistances
- GetMaxColumnCount()
: BaseViewObject
- GetMaximum()
: StatBase
, StatMinMaxBase
, RangeHandler
, ImageFormatBase
, DAT
, DF3
, IPL
, TIF
, DAT
, DF3
, PNG
, TIF
, PNG
, IPL
, StatAccumulator< MAX_MOMENT, DATATYPE >
- GetMaximumPosition()
: StatBase
, StatMinMaxBase
- GetMaxLength()
: SequenceListImpl
, ConstSequenceList
, SequenceList
- GetMaxLevel()
: MapIso
- GetMaxRad()
: CartoonRenderOptions
, TraceRenderOptions
- GetMaxV()
: GradientColorOp
- GetMaxWeight()
: SubstWeightMatrix
- GetMean()
: MapIso
, StatBase
, StatAccumulator< MAX_MOMENT, DATATYPE >
- GetMeasurement()
: Measurement
- GetMeasureMode()
: MeasureTool
- GetMembraneAxis()
: FindMemParam
- GetMenu()
: DrawOverlay
, NullOverlay
, Overlay
, PointlistOverlayBase
, PanelManager
, Perspective
, MaskOverlay
- GetMenuBar()
: Perspective
- GetMessage()
: QueryError
- GetMessageCount()
: MessageLevel
- GetMessagesCount()
: MessageWidget
- GetMessageWidget()
: GostyApp
- GetMethod()
: MMCifInfo
- GetMethodDetails()
: MMCifInfoBioUnit
- GetMin()
: AlignedCuboid
, Distances
, OctreeNode
- GetMinDistance()
: CoordFrame
- GetMinDistBetwCenterOfMassAndView()
: CoordFrame
- GetMinimum()
: StatBase
, StatAccumulator< MAX_MOMENT, DATATYPE >
, RangeHandler
, ImageFormatBase
, DF3
, IPL
, PNG
, DAT
, DF3
, IPL
, PNG
, TIF
, StatMinMaxBase
, DAT
- GetMinimumPosition()
: StatBase
, StatMinMaxBase
- GetMinLength()
: ConstSequenceList
, SequenceList
, SequenceListImpl
- GetMinLevel()
: MapIso
- GetMinMax()
: EntityView
- GetMinV()
: GradientColorOp
- GetMinWeight()
: SubstWeightMatrix
- GetMMCifEntityIdTr()
: MMCifInfo
- GetMMCifPDBChainTr()
: MMCifInfo
- GetMode()
: CustomRenderer
, DebugRenderer
, IndexedVertexArray
, EditorBase
- GetModel()
: SceneWin
- GetModelDetails()
: MMCifInfoStructDetails
- GetModelDistance()
: ClashEvent
- GetModelIndexes()
: SequenceModel
- GetModelTypeDetails()
: MMCifInfoStructDetails
- GetModificationDate()
: Compound
- GetMoment()
: StatAccumulator< MAX_MOMENT, DATATYPE >
- GetMousePosition()
: DataViewerPanelBase
- GetName()
: Compound
, ColorOp
, GfxNode
, EntityRenderer
, Overlay
, PanelWidgetContainer
, TabbedPanelBar
, EntityPartNode
, LabelNode
, Measurement
, Tool
, OpBase
, OrOp
, XorOp
, AlgorithmBase
, InfoGroup
, InfoHandle
, EleImpl
, InfoItem
, StarDataItem
, AtomBase
, EntityBase
, AtomImpl
, ChainImpl
, ResidueImpl
, TorsionImpl
, Prop
, ResidueBase
, TorsionHandle
, SequenceImpl
, ConstSequenceHandle
, Preset
, RenderOp
, VisibilityOp
, Table
, SequenceRow
, SequenceHandle
, QSscoreEntity
, EntityImpl
, InfoSet
, ChainBase
, AndOp
, SplitterPanelBar
- GetNames()
: Interaction
, ProfileDB
- GetNear()
: Scene
- GetNext()
: ChainHandle
, ChainImpl
, ResidueHandle
- GetNextLine()
: LineIterator
- GetNode()
: Polygon2
- GetNodeCount()
: Polygon2
, Scene
- GetNormal()
: IndexedVertexArray
, Plane
- GetNormalizeOnSave()
: DAT
, DF3
, IPL
, MRC
, PNG
, Spider
, TIF
, DAT
, DF3
, DX
, IPL
, MRC
, Situs
, Spider
, TIF
, PNG
, Situs
, DX
- GetNormalizer()
: DataViewerPanelBase
, DataViewer
- GetNormalSmoothFactor()
: GfxObj
, CartoonRenderOptions
, TraceRenderOptions
- GetNormStdDev()
: Distances
- GetNotEmptyRenderModes()
: Entity
- GetNTerModifier()
: Forcefield
- GetNullModel()
: ProfileHandle
- GetNum()
: MMCifInfoRevisions
, ResNum
- GetNumAddRules()
: GromacsBlockModifier
- GetNumber()
: ResidueImpl
, ResidueBase
- getNumBodies()
: DensityForce
- GetNumCMaps()
: Topology
- GetNumConservedContacts()
: lDDTScorer
- GetNumDensityBodies()
: Topology
- GetNumDistanceConstraints()
: Topology
- GetNumExclusions()
: Topology
- GetNumFGMDHBondAcceptors()
: Topology
- GetNumFGMDHBondDonors()
: Topology
- GetNumFreeResidues()
: Domains
- GetNumHarmonicAngles()
: Topology
- GetNumHarmonicBonds()
: Topology
- GetNumHarmonicDistanceRestraints()
: Topology
- GetNumHarmonicImpropers()
: Topology
- GetNumHarmonicPositionRestraints()
: Topology
- GetNumHydrogenRules()
: GromacsHydrogenConstructor
- GetNumLJPairs()
: Topology
- GetNumNodesForLevel()
: MapOctree
- GetNumParticles()
: Topology
- getNumParticles()
: DensityForce
- GetNumPeriodicDihedrals()
: Topology
- GetNumPeriodicImpropers()
: Topology
- GetNumPositionConstraints()
: Topology
- GetNumpyMatrix()
: Table
- GetNumReplaceRules()
: GromacsBlockModifier
- GetNumResidues()
: Dist2Mean
- GetNumSamples()
: StatAccumulator< MAX_MOMENT, DATATYPE >
- GetNumStructures()
: DistanceMap
, Dist2Mean
- GetNumTotalContacts()
: lDDTScorer
- GetNumUreyBradleyAngles()
: Topology
- GetOBCScaling()
: Topology
- GetOBCScalings()
: Topology
- GetObservedData()
: DataObserver
- GetObsoleteInfo()
: MMCifInfo
- GetOccupancy()
: AtomBase
, AtomImpl
- GetODRLine()
: CoordFrame
, Vec3List
- GetODRPlane()
: Vec3List
, CoordFrame
- GetOffset()
: DataViewer
, DataViewerPanelBase
, ConstSequenceHandle
, SequenceHandle
, SequenceImpl
- GetOligoLDDTScorer()
: QSscorer
- GetOmegaTorsion()
: ResidueBase
, ResidueImpl
- GetOneLetterCode()
: Compound
, ResidueImpl
, AlignmentHandle
, SequenceImpl
, ConstSequenceHandle
, SequenceHandle
, ResidueBase
- GetOP()
: LogicOPNode
- GetOp()
: Preset
, PresetEditorListModel
, GradientLevelColorOpWidget
, ByElementColorOpWidget
, ByChainColorOpWidget
, VisibilityOpWidget
, UniformColorOpWidget
, RenderOpWidget
- GetOpacity()
: Entity
, GfxObj
, GfxObjBase
- GetOpCount()
: Preset
- GetOperations()
: MMCifInfoBioUnit
, MMCifInfo
- GetOperationsIntervalList()
: MMCifInfoBioUnit
- GetOperatorName()
: CompositeMask
- GetOps()
: Preset
- GetOptimalPrefactors()
: Table
- GetOption()
: ToolOptions
- GetOptions()
: CartoonRenderer
, CPKRenderer
, SimpleRenderer
, LineTraceRenderer
, EntityRenderer
, Entity
, DebugRenderer
, SlineRenderer
, TraceRenderer
, ToolOptionGroup
, CustomRenderer
, RenderModeWidget
- GetOrCreateRenderer()
: Entity
- GetOrGenVert()
: OctreeIsocont
- GetOrigin()
: Plane
, Ellipse2
, Line2
, Hyperbola2
, Rotation3
, Line3
, Sphere
- GetOriginalMap()
: MapIso
- GetOriginalPos()
: BondHandle
, Dihedral
, TorsionHandle
, AtomBase
, ConnectorImpl
- GetOSTVersionUsed()
: CompoundLib
- GetOther()
: BondHandle
- GetOutline()
: GfxObjBase
, GfxObj
- GetOutlineColor()
: Primitive
- GetOutlineExpandColor()
: GfxObjBase
, IndexedVertexArray
, GfxObj
- GetOutlineExpandFactor()
: GfxObjBase
, IndexedVertexArray
, GfxObj
- GetOutlineMode()
: GfxObjBase
, GfxObj
, IndexedVertexArray
- GetOutlineWidth()
: IndexedVertexArray
, GfxObj
, GfxObjBase
- GetOutputLogging()
: TextLogger
- GetOverlayId()
: OverlayManager
- GetOverlayManager()
: DataViewer
- GetOverlayName()
: OverlayManager
- getOwner()
: DensityForceImpl
- GetP()
: Plane
- GetPageFirst()
: MMCifInfoCitation
- GetPageLast()
: MMCifInfoCitation
- GetPainter()
: BaseRow
- GetPainterCount()
: BaseRow
- GetPainters()
: BaseRow
, SequenceModel
- GetPanelBar()
: PanelWidgetContainer
- GetPanels()
: Perspective
- GetParam()
: StereoChemicalParams
, Interaction
- GetParent()
: InfoGroup
, InfoHandle
, PythonContext
, GfxNode
, SceneNode
, InfoItem
, Node
, EleImpl
- GetParm()
: SelNode
- getParticleMass()
: DensityForce
- GetPath()
: InfoGroup
, EleImpl
, CalculateSurfaceSettingsDialog
- GetPDBID()
: MMCifInfoObsolete
- GetPDBMMCifChainTr()
: MMCifInfo
- GetPeakList()
: HighestPeakSearch3DBase
- GetPen()
: SymbolDrawingStrategy
- GetPenColor()
: SymbolDrawingStrategy
- GetPeriodicBoxExtents()
: Simulation
- GetPeriodicDihedralIndices()
: Topology
- GetPeriodicDihedralParameters()
: Topology
- GetPeriodicDihedrals()
: Topology
- GetPeriodicImproperIndices()
: Topology
- GetPeriodicImproperParameters()
: Topology
- GetPeriodicImpropers()
: Topology
- GetPerResidueScores()
: MappedLDDTScorer
- GetPerspective()
: GostyApp
- GetPhasecolor()
: TIF
- GetPhi()
: Rotation3
- GetPhiTorsion()
: ResidueBase
, ResidueImpl
- GetPhysicalExtent()
: FrequencyDomain
, SpatialDomain
, HalfFrequencyDomain
- GetPixel()
: RasterImage
- GetPixelSampling()
: ConstData
, DataViewerPanelBase
, PixelSampling
- GetPlane()
: MapSlab
- GetPointCloud()
: PointCloudManager
- GetPoints()
: PointCloud
- GetPointWeight()
: DSSPAccessibilityParam
- GetPolyMode()
: CartoonRenderOptions
- GetPos()
: Dihedral
, ConstSequenceHandle
, AtomBase
, MouseEvent
, BondHandle
, AlignmentHandle
, SequenceImpl
, SequenceListImpl
, SequenceHandle
, ConnectorImpl
, MyGradientStop
, TorsionHandle
- GetPositionConstraints()
: Topology
- GetPositions()
: Simulation
- GetPotentialEnergy()
: Simulation
- GetPreset()
: PresetListModel
, ImmutablePresetInfoHandler
- GetPresets()
: ImmutablePresetInfoHandler
- GetPrev()
: ChainImpl
, ResidueHandle
, ChainHandle
- GetPrimaryConnector()
: AtomImpl
- GetPrincipalAxes()
: Vec3List
- GetProfile()
: ProfileDB
- GetProgress()
: Progress
- GetProjection()
: Scene
- GetPropAsString()
: ConstGenericPropContainer< H >
- GetProperty()
: GradientColorOp
- GetPropList()
: GenericPropContainerImpl
, ConstGenericPropContainer< H >
- GetPropMap()
: ConstGenericPropContainer< H >
, GenericPropContainerImpl
- GetPsi()
: Rotation3
- GetPsiTorsion()
: ResidueImpl
, ResidueBase
- GetPublishedIn()
: MMCifInfoCitation
- GetPubMed()
: MMCifInfoCitation
- GetPyShell()
: GostyApp
- GetQGradient()
: ImmutableGradientInfoHandler
- GetQGradients()
: ImmutableGradientInfoHandler
- GetQuadIndices()
: IndexedVertexArray
- GetQualifiedAtomName()
: UniqueAtomIdentifier
- GetQualifiedName()
: ResidueBase
, AtomImpl
, AtomBase
, ResidueImpl
- GetQuat()
: Rotation3
- GetQuery()
: QueryViewWrapper
, QueryEditorWidget
- GetQueryFlags()
: QueryEditorWidget
- GetQueryString()
: Query
, QueryImpl
, QueryError
- GetQueryText()
: QueryEditorWidget
- GetQueryView()
: CurrentSelectionNode
, Entity
, EntityPartNode
- GetQueryViewsList()
: SceneWinModel
- GetRadius()
: Circle2
, AtomBase
, Sphere
, PointCloud
, AtomImpl
- GetRadiusMult()
: CPKRenderOptions
- GetRadiusSquare()
: WithinParam
- GetRange()
: PythonToken
, QueryToken
, PythonContext
, QueryError
- GetReadSeqRes()
: PDBReader
, MMCifReader
, PDBReader
- GetReal()
: NullData
, ConstImageHandle
, ImageStateImpl< T, D >
, FrequencyDomain
, ConstData
, ImageHandle
, ImageStateBase
, HalfFrequencyDomain
, SpatialDomain
- GetReceiver()
: ToolOptionButton
- GetRed()
: Color
- GetRef()
: WithinParam
- GetReferences()
: lDDTScorer
- GetRel()
: MyGradientStop
, Gradient::Stop
- GetRenderMode()
: RenderModeNode
, TubeWidget
, CPKWidget
, SlineWidget
, RenderModeWidget
, CPKRenderOptions
, TraceRenderOptions
, SimpleRenderOptions
, LineTraceRenderOptions
, GfxObjBase
, CartoonRenderOptions
, GfxObj
, CustomRenderOptions
, RenderOptions
, SlineRenderOptions
, LineTraceWidget
, CustomWidget
, HSCWidget
, RenderOp
, TraceWidget
, WireframeWidget
, EmptyMode
, SimpleWidget
- GetRenderModeName()
: Entity
- GetRenderView()
: Entity
- GetReplacedPDBID()
: MMCifInfoObsolete
- GetReplaceRuleName()
: GromacsBlockModifier
- GetReplaceRuleNewCharge()
: GromacsBlockModifier
- GetReplaceRuleNewName()
: GromacsBlockModifier
- GetReplaceRuleNewType()
: GromacsBlockModifier
- GetResidue()
: AtomHandle
, AlignmentHandle
, ConstSequenceHandle
, SequenceHandle
, AtomImpl
, AlignedColumn
, SequenceImpl
, Diag
, AtomView
- GetResidueAccessibility()
: NACCESSAccessibilityParam
, DSSPAccessibilityParam
- GetResidueByIndex()
: ChainHandle
, ChainView
- GetResidueCount()
: EntityHandle
, ChainHandle
, ChainView
, ChainImpl
, EntityView
, EntityImpl
- GetResidueIndex()
: ChainView
, AlignmentHandle
, SequenceListImpl
, SequenceHandle
, ConstSequenceHandle
, AlignedColumn
, SequenceImpl
- GetResidueList()
: ChainImpl
, EntityView
, ChainHandle
, ChainView
, EntityHandle
- GetResidueName()
: UniqueAtomIdentifier
- GetResidueRenamingCTer()
: Forcefield
- GetResidueRenamingMain()
: Forcefield
- GetResidueRenamingNTer()
: Forcefield
- GetResidueRenamingTwoTer()
: Forcefield
- GetResNum()
: UniqueAtomIdentifier
- GetResolution()
: MMCifInfo
- getResolution()
: DensityForce
- GetResolution()
: MMCifInfo
- GetRestrictChains()
: MMCifReader
- GetRevisions()
: MMCifInfo
- GetRFree()
: MMCifInfo
- GetRGB()
: Color
- GetRGBA()
: Color
- GetRHS()
: LogicOPNode
- GetRingAtomCount()
: RingFinder
- GetRingBondCount()
: RingFinder
- GetRings()
: RingFinder
- GetRMSD()
: CoordFrame
- GetRole()
: ConstSequenceHandle
, SequenceImpl
, SequenceHandle
- GetRoot()
: EleImpl
- GetRootMeanSquare()
: StatAccumulator< MAX_MOMENT, DATATYPE >
, StatBase
- GetRootNode()
: Scene
- GetRot()
: Transform
- GetRotationAngle()
: Rotation3
- GetRotationAxis()
: Rotation3
- GetRotationMatrix()
: Rotation3
- GetRow()
: Mat3
, BaseViewObject
, SceneNode
- GetRowCount()
: AlignedColumn
, BaseViewObject
- GetRTC()
: Scene
- GetRWork()
: MMCifInfo
- GetSampling()
: ImageStateImpl< T, D >
, ImageStateBase
, ImageStateImpl< T, D >
- GetSat()
: Color
- GetScale()
: Exporter
- getScaling()
: DensityForce
- GetSceneWin()
: GostyApp
- GetScore()
: ContactPredictionScoreResult
, ProfileColumn
- GetSecond()
: ConnectorImpl
, TorsionHandle
, Dihedral
, BondHandle
- GetSecondaryConnectors()
: AtomImpl
- GetSecondAtom()
: StereoChemicalAngleViolation
, ClashEvent
, StereoChemicalBondViolation
- GetSecStructure()
: ResidueBase
, ResidueImpl
- GetSelectedPath()
: TerminalUsageDialog
- GetSelection()
: DataViewer
, DataViewerPanelBase
, Entity
, VisibilityOp
, RenderOp
, ColorOp
- GetSelectionColor()
: EntityRenderer
- GetSelectionColorOutline()
: EntityRenderer
- GetSelectionFlags()
: VisibilityOp
, ColorOp
, RenderOp
- GetSelectionMode()
: DataViewerPanelBase
, Scene
, SelectionTool
- GetSeqBegin()
: MMCifInfoStructRefSeq
- GetSeqEnd()
: MMCifInfoStructRefSeq
- GetSeqHack()
: Entity
, BackboneTrace
- GetSeqRes()
: PDBReader
, MMCifReader
- GetSeqRNum()
: MMCifInfoStructRefSeqDif
- GetSequence()
: SequenceListImpl
, ProfileHandle
, SequenceRow
, AlignmentHandle
, SequenceListImpl
- GetSequenceHandler()
: FileTypeDialog
- GetSequenceOffset()
: AlignmentHandle
- GetSequenceRole()
: AlignmentHandle
- GetSequences()
: AlignmentHandle
- GetSequenceViewer()
: GostyApp
- GetSequentialAtoms()
: CRDReader
, PQRReader
, CRDReader
, PQRReader
- GetShadow()
: Scene
- GetShadowQuality()
: Scene
- GetShadowWeight()
: Scene
- GetShape()
: CircleDrawingStrategy
, CrosshairCircleDrawingStrategy
, SymbolDrawingStrategy
, CrosshairSquareDrawingStrategy
, SquareDrawingStrategy
- GetShift()
: FractionalShift
, MaskOverlay
- GetShowAction()
: PanelBar
- GetShowCenter()
: Scene
- GetShowExportAspect()
: Scene
- GetShownMapType()
: MapIso
- GetShowScores()
: SelectRefDialog
- GetSigma()
: Topology
- GetSigmas()
: Topology
- GetSigned()
: DAT
, TIF
, DAT
, TIF
- GetSiteLoaderIdents()
: FileLoader
- GetSize()
: Extent
, MMCifInfoRevisions
, DistanceMap
, AlignedCuboid
, ImageStateImpl< T, D >
, TriMatrix< T >
, StarLoopDesc
, LineIterator
, ConstData
, MMCifInfoRevisions
, StarLoopDesc
- GetSkewness()
: StatAccumulator< MAX_MOMENT, DATATYPE >
, StatBase
- GetSlab()
: DataViewer
, DataViewerPanelBase
, Size
- GetSlotMethod()
: ToolOptionButton
- GetSolid()
: GfxObjBase
, IndexedVertexArray
, GfxObj
- GetSolidcolor()
: IndexedVertexArray
- GetSolidColor()
: GfxObj
, GfxObjBase
- GetSpatialOrigin()
: ImageStateBase
, HalfFrequencyDomain
, SpatialDomain
, ImageHandle
, FrequencyDomain
, ConstImageHandle
, NullData
, ConstData
, ImageStateImpl< T, D >
- GetSpatialSampling()
: ConstData
, PixelSampling
- GetSphereDetail()
: CustomRenderOptions
, CPKRenderOptions
, PrimList
- GetSphereMode()
: CPKRenderOptions
- GetSphereRad()
: CustomRenderOptions
- GetSplineDetail()
: SlineRenderOptions
, CartoonRenderOptions
- GetStandardDeviation()
: StatAccumulator< MAX_MOMENT, DATATYPE >
, StatBase
- GetStart()
: ExtentIterator
, Extent
, AlignedRegion
, Rectangle2
- GetStartTime()
: CoordSource
, CoordGroupHandle
- GetState()
: AtomImpl
- GetStaticColumn()
: SequenceTableView
- GetStaticField()
: SequenceTableView
- GetStaticRow()
: SequenceTableView
- GetStatus()
: MMCifInfoRevisions
- GetStdDev()
: Distances
, MapIso
- GetStereoAlg()
: Scene
- GetStereoDistance()
: Scene
- GetStereoFlip()
: Scene
- GetStereoIOD()
: Scene
- GetStereoMode()
: Scene
- GetStereoView()
: Scene
- GetStop()
: ButterworthLowPassFilter
- GetStops()
: Gradient
- GetStrandEcc()
: CartoonRenderOptions
- GetStrandMode()
: CartoonRenderOptions
- GetStrandProfileType()
: CartoonRenderOptions
- GetStrandThickness()
: CartoonRenderOptions
- GetStrandWidth()
: CartoonRenderOptions
- GetStrictHydrogens()
: RuleBasedProcessor
- GetString()
: ConstSequenceHandle
, SequenceHandle
, SequenceImpl
- GetStringProp()
: ConstGenericPropContainer< H >
- GetStringProperty()
: AtomBase
, AtomImpl
, ResidueImpl
, ResidueBase
- GetStringRepr()
: EleImpl
- GetStructDetails()
: MMCifInfo
- GetStructRefs()
: MMCifReader
, MMCifInfo
- GetSub()
: EleImpl
- GetSubContexts()
: PythonContext
- GetSubformat()
: MRC
- GetSubimage()
: Nanoscope
, TIF
, Nanoscope
- GetSubList()
: EleImpl
- GetSubs()
: EleImpl
- GetSum()
: StatBase
, StatAccumulator< MAX_MOMENT, DATATYPE >
- GetSuperposition()
: _CachedRMSD
- GetSurfaceHandler()
: FileTypeDialog
- GetSymbolShape()
: PointlistOverlayBase
- GetSymbolSize()
: PointlistOverlayBase
, SymbolDrawingStrategy
- GetSymbolStrength()
: SymbolDrawingStrategy
- GetT()
: FermiHighPassFilter
, FermiLowPassFilter
- GetTabWidth()
: PythonShellWidget
- GetTarget()
: InputEvent
- GetTexCoord()
: IndexedVertexArray
- GetText()
: RenderModeWidget
, HSCWidget
, SimpleWidget
, GradientPresetWidget
, ByElementWidget
, LineTraceWidget
, WireframeWidget
, SlineWidget
, TubeWidget
, UniformColorWidget
, ByChainWidget
, CustomWidget
, ColorOptionsWidget
, CPKWidget
, RenderOptionsWidget
, EmptyMode
, TraceWidget
, ByEntityWidget
, PresetWidget
- GetTextData()
: InfoGroup
, EleImpl
, InfoHandle
- GetTF()
: GfxObj
- GetTheta()
: Rotation3
- GetThird()
: Dihedral
, TorsionHandle
- GetThirdAtom()
: StereoChemicalAngleViolation
- GetTitle()
: MMCifInfoCitation
, MMCifInfoStructDetails
- GetTMat()
: FragmentImpl
- GetToolOptions()
: Tool
- GetToolOptionsWin()
: GostyApp
- GetTools()
: ToolManager
- GetToOrigin()
: Exporter
- GetTopology()
: Simulation
- GetTorsionList()
: ResidueImpl
, ResidueHandle
, ResidueImpl
- GetTorsionMap()
: EntityImpl
- GetTotalMessagesCount()
: MessageWidget
- GetTraj()
: TrajObserver
- GetTrans()
: Transform
- GetTransform()
: Scene
, EntityImpl
, EntityHandle
, GDTResult
- GetTransformationMatrix()
: EntityHandle
- GetTransposedMatrix()
: Transform
- GetTri()
: SurfaceHandle
- GetTriIDList()
: SurfaceImpl
, SurfaceHandle
- GetTriIndices()
: IndexedVertexArray
- GetTubeProfileType()
: CartoonRenderOptions
- GetTubeRadius()
: CartoonRenderOptions
, TraceRenderOptions
- GetTubeRatio()
: CartoonRenderOptions
- GetTwistHack()
: CartoonRenderOptions
, BackboneTrace
- GetType()
: ChainImpl
, ToolOption
, MMCifInfoTransOp
, ImageHandle
, NullData
, ConstData
, ImageStateImpl< T, D >
, GfxObj
, EleImpl
, ConstImageHandle
, GfxNode
, Diag
, PythonToken
, ChainBase
, ImageStateBase
, InfoItem
, Measurement
, MMCifInfoTransOp
, QueryToken
, BuildingBlock
- GetTypeAsString()
: PythonToken
- GetTypeName()
: Prop
- GetTypes()
: Interaction
, BuildingBlock
- GetUnique()
: Table
- GetUniqueID()
: WidgetFactory
, Widget
- GetUnkAtomTreatment()
: RuleBasedProcessor
- GetUnkResidueTreatment()
: RuleBasedProcessor
- GetUpperLimit()
: ToolOptionNum< T, C >
- GetUreyBradleyAngleIndices()
: Topology
- GetUreyBradleyAngleParameters()
: Topology
- GetUreyBradleyAngles()
: Topology
- GetVA()
: GfxObj
- GetVal()
: Color
- GetValue()
: PythonToken
, StarDataItem
, InfoItem
, Peak
, StarDataItem
, ToolOptionNum< T, C >
, ToolOptionEnum
- GetValueRange()
: QueryToken
- GetVariance()
: StatAccumulator< MAX_MOMENT, DATATYPE >
, StatBase
- GetVdWRadius()
: DSSPAccessibilityParam
, NACCESSAccessibilityParam
- GetVec3Prop()
: ConstGenericPropContainer< H >
- GetVecA()
: Cuboid
- GetVecB()
: Cuboid
- GetVecC()
: Cuboid
- GetVecRepr()
: EleImpl
- GetVector()
: MMCifInfoTransOp
, CuboidAxis
- GetVelocities()
: Simulation
- GetVerboseName()
: ToolOption
, ToolOptionGroup
- GetVerbosityLevel()
: Logger
- GetVert()
: IndexedVertexArray
- GetVertex()
: SurfaceHandle
- GetVertexCount()
: IndexedVertexArray
- GetVertexIDList()
: SurfaceHandle
, SurfaceImpl
- GetView()
: Entity
, ColorOp
- GetViewEntity()
: SceneSelection
- GetViewerMax()
: DataViewer
, DataViewerPanelBase
- GetViewerMin()
: DataViewerPanelBase
, DataViewer
- GetViewModeMenu()
: PanelBar
- GetViewport()
: Scene
- GetViewUnion()
: SceneSelection
- GetVisible()
: EntityPartNode
- GetVol()
: Size
- GetVolume()
: Size
, Extent
, AlignedCuboid
, MMCifInfoCitation
- GetW()
: Vec4
- GetWeight()
: SubstWeightMatrix
, StatAccumulator< MAX_MOMENT, DATATYPE >
- GetWeightedStdDev()
: Distances
- GetWidget()
: WidgetGeomHandler
, GostyApp
, EventButton
, PanelBarWidgetHolder
- GetWidth()
: Rectangle2
, Extent
, RasterImage
, Size
, FormattedLine
- GetWriteMultiModel()
: PDBWriter
- GetX()
: Vec4
, Vec2
, Vec3
- GetXAxisRotation()
: Transform
- GetY()
: Vec4
, Vec3
, Vec2
- GetYAxisRotation()
: Transform
- GetYear()
: MMCifInfoCitation
- GetZ()
: Vec4
, Vec3
- GetZAxisRotation()
: Transform
- GetZeroOccTreatment()
: Processor
- GetZeroOccupancy()
: Checker
- GetZoomScale()
: DataViewerPanelBase
, DataViewer
- GfxNode()
: GfxNode
- GfxObj()
: GfxObj
- GfxObjBase()
: GfxObjBase
- GfxSceneNode()
: GfxSceneNode
- GfxTestObj()
: GfxTestObj
- Give()
: WidgetPool
- GLCanvas()
: GLCanvas
- GLCleanup()
: GfxObj
- global_score()
: QSscorer
- GLWin()
: GLWin
- Gly()
: Builder
- GostExporter()
: GostExporter
- GostyMainWindow()
: GostyMainWindow
- gp_get()
: ConstGenericPropContainer< H >
- GpImpl()
: SequenceHandle
, ResidueBase
, EntityBase
, ConstSequenceHandle
, ChainBase
, AtomBase
, EntityBase
, BondHandle
, ResidueBase
, SequenceHandle
, BondHandle
, ChainBase
, ConstSequenceHandle
, AtomBase
- Gradient()
: Gradient
- GradientColorOp()
: GradientColorOp
- GradientFromInfo()
: Gradient
- GradientLevelColorOp()
: GradientLevelColorOp
- GradientLevelGetCol()
: GradientLevelGetCol
- GradientToInfo()
: Gradient
- Green()
: Color
- GromacsBlockModifier()
: GromacsBlockModifier
- GromacsHydrogenConstructor()
: GromacsHydrogenConstructor
- Gutter()
: Gutter
- GutterBlock()
: GutterBlock