TMScoreResult Class Reference

Public Member Functions
def	__init__

Data Fields
	rmsd_common
	tm_score
	max_sub
	gdt_ts
	gdt_ha
	rmsd_below_five
	transform

Detailed Description

Holds the result of running TMscore

.. attribute:: rmsd_common
  
  The RMSD of the common Calpha atoms of both structures

.. attribute:: rmsd_below_five

  The RMSD of all Calpha atoms that can be superposed below five Angstroem
  
.. attribute:: tm_score

  The TM-score of the structural superposition

.. attribute:: transform

  The transform that superposes the model onto the reference structure.
  
  :type: :class:`~ost.geom.Mat4`

.. attribute:: gdt_ha

  The GDT_HA of the model to the reference structure.

.. attribute:: gdt_ts

  The GDT_TS of the model to the reference structure.

Definition at line 202 of file tmtools.py.

Constructor & Destructor Documentation

def __init__	(		self,
			rmsd_common,
			tm_score,
			max_sub,
			gdt_ts,
			gdt_ha,
			rmsd_below_five,
			transform
	)

Definition at line 234 of file tmtools.py.

Field Documentation

gdt_ha

Definition at line 239 of file tmtools.py.

gdt_ts

Definition at line 238 of file tmtools.py.

max_sub

Definition at line 237 of file tmtools.py.

rmsd_below_five

Definition at line 240 of file tmtools.py.

rmsd_common

Definition at line 235 of file tmtools.py.

tm_score

Definition at line 236 of file tmtools.py.

transform

Definition at line 241 of file tmtools.py.

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The documentation for this class was generated from the following file:

• build-2.7-doc/stage/lib64/python3.6/site-packages/ost/bindings/tmtools.py