Here is a list of all struct and union fields with links to the structures/unions they belong to:
- a -
- A
: Units
- a1
: ClashInfo
, AngleViolationInfo
, BondViolationInfo
- a2
: ClashInfo
, BondViolationInfo
, AngleViolationInfo
- a3
: AngleViolationInfo
- A3MToCS()
: HHblits
- A3MToProfile()
: HHblits
- a_ci_
: PointlistOverlayBase
- a_cr_
: PointlistOverlayBase
- a_settings_
: PointlistOverlayBase
- a_sq_
: PointlistOverlayBase
- aa_dict
: ContactWeightMatrix
, PairSubstWeightMatrix
- aa_list
: ContactWeightMatrix
, PairSubstWeightMatrix
- aa_rendering_cb_
: LineTraceWidget
, SimpleWidget
, SlineWidget
, WireframeWidget
- aaindex_entries
: AAIndex
- aalines_flag_
: GfxObj
- ABFAC
: Prop
- About()
: InitMenuBar
- accept()
: FileTypeDialog
- acceptor
: HBond
- acceptors
: HBondableAtoms
- ACHARGE
: Prop
- Acquire()
: AdminRights
- action
: SurfaceContextMenu
, SecStructContextMenu
, AlignmentContextMenu
- actions_
: ToolBarOptionsWidget
- Activate()
: Shader
, Tool
- ActivateOverlay()
: OverlayManager
- ActivateTool()
: ToolBar
- active_
: MaskOverlay
- active_color
: PointlistOverlayBaseSettings
- active_color_
: PointlistOverlayBase
- active_color_b_
: PointlistOverlayBaseSettings
- active_state_
: StateMachine
- ActiveNodesChanged()
: SceneWin
, InspectorWidget
- ActiveToolChanged()
: GLWin
, ToolManager
- Add()
: WidgetPool
, InfoSet
, StarLoopDesc
, PDBize
, SpatialOrganizer< ITEM, VEC >
, Distances
, Dist2Mean
, GradientEdit
, GradientPresetWidget
, PresetEditor
, PresetWidget
, AminoAcidSet
, GfxNode
, FastSphereRenderer
, Scene
, IndexedVertexArray
, PointlistOverlay
, ToolOptionEnum
- add_
: GradientEdit
- add_action
: GradientPresetWidget
, PresetWidget
- add_angles
: Settings
- add_barostat
: Settings
- add_bonds
: Settings
- add_button_
: GradientPresetWidget
, PresetEditor
, PresetWidget
- add_cmaps
: Settings
- add_dihedrals
: Settings
- add_exclusions
: Settings
- add_gbsa
: Settings
- add_impropers
: Settings
- add_mode_
: MaskOverlay
- add_nonbonded
: Settings
- add_scalar()
: ImageStateImpl< T, D >
- add_thermostat
: Settings
- AddAction()
: ContextMenu
, ToolBar
- AddAddRule()
: GromacsBlockModifier
- AddAlignedSeq()
: MMCifInfoStructRef
- AddAlignment()
: SequenceViewer
- AddAllInclusiveBonds()
: EntityView
- AddAltAtomPos()
: EditorBase
, ResidueImpl
- AddAngle()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- AddAssembly()
: LinearIndexer
- AddAtom()
: Compound
, Diag
, GfxView
, ChainView
, EntityView
, BuildingBlock
, ResidueView
- AddAtomInternal()
: EntityView
- AddAtomRenamingRule()
: Forcefield
- AddAuthorsToCitation()
: MMCifInfo
- AddBioUnit()
: MMCifInfo
- AddBlockModifier()
: Forcefield
- AddBond()
: Forcefield
, GromacsBlockModifier
, Compound
, GfxView
, AtomView
, EntityView
, BuildingBlock
- AddBuildingBlock()
: Forcefield
- AddButton()
: ButtonBox
- AddButtonBox()
: ButtonBar
- AddCallback()
: Progress
- AddChain()
: Diag
, SequenceViewObject
, MMCifInfoBioUnit
, EntityView
- AddCharacters()
: LinearCharacterContainer
- AddChild()
: SceneNode
- AddCitation()
: MMCifInfo
- AddCMap()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
, Topology
- AddCol()
: Table
- AddColumn()
: ProfileHandle
- AddCommand()
: PythonInterpreterWorker
- AddCompound()
: CompoundLib
- AddConstraint()
: BuildingBlock
, Forcefield
- AddContext()
: PythonContext
- AddCyl()
: PrimList
- AddCylinder()
: IndexedVertexArray
- AddDefault()
: InfoHandle
- AddDeleteAtom()
: GromacsBlockModifier
- AddDiag()
: Diagnostics
- AddDif()
: MMCifInfoStructRefSeq
- AddDihedral()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- AddDisplayMode()
: BaseViewObject
- AddDistance()
: DistanceMap
- AddDistanceConstraint()
: Topology
- AddDockWidget()
: MainWindow
- AddEntity()
: SequenceViewer
- AddEntityBranchLink()
: MMCifInfo
- addError()
: _XMLTestResult
- AddExclusion()
: BuildingBlock
, Topology
- addFailure()
: _XMLTestResult
- AddFGMDHBondAcceptor()
: Topology
- AddFGMDHBondDonor()
: Topology
- AddFrame()
: CoordGroupHandle
, CoordSource
, InMemCoordSource
- AddFrames()
: CoordGroupHandle
- AddGradientToInfo()
: GradientListModel
- AddHarmonicAngle()
: Topology
- AddHarmonicBond()
: Topology
- AddHarmonicDistanceRestraint()
: Topology
- AddHarmonicImproper()
: Topology
- AddHarmonicPositionRestraint()
: Topology
- AddHydrogenConstructor()
: Forcefield
- AddHydrogenRule()
: GromacsHydrogenConstructor
- AddIcoSphere()
: IndexedVertexArray
- AddImplicitGenborn()
: Forcefield
- AddImproper()
: BuildingBlock
, Forcefield
, GromacsBlockModifier
- AddInt()
: Diag
- AddItem()
: GradientListModel
, PresetEditorListModel
, PresetListModel
- AddLabel()
: GfxObj
- AddLF()
: IsosurfaceGenerator
- AddLine()
: PrimList
, IndexedVertexArray
- AddLJ()
: Forcefield
- AddLJPair()
: Forcefield
, Topology
- AddMass()
: Forcefield
- AddMesh()
: PrimList
- AddMMCifEntityIdTr()
: MMCifInfo
- AddMMCifPDBChainTr()
: MMCifInfo
- AddNode()
: Polygon2
, SceneWinModel
, PolygonMask
- AddNodeEntryList()
: BackboneTrace
- AddObserver()
: RenderOptions
- AddOp()
: Preset
- AddOperation()
: MMCifInfo
- AddOperations()
: MMCifInfoBioUnit
- AddOption()
: ToolOptionGroup
, ToolOptions
- AddOverlay()
: DataViewer
, OverlayManager
- AddPDBMMCifChainTr()
: MMCifInfo
- AddPeriodicDihedral()
: Topology
- AddPeriodicImproper()
: Topology
- AddPersistentWidget()
: MainArea
- AddPoint()
: PointCloud
, PrimList
- AddPointCloud()
: PointCloudManager
- AddPositionConstraint()
: Simulation
, Topology
- AddPositionConstraints()
: Simulation
- AddPositions()
: LinearPositionContainer
- AddPresetToInfo()
: PresetListModel
- AddProfile()
: ContextProfileDB
, ProfileDB
- AddQuad()
: IndexedVertexArray
- AddReplaceRule()
: GromacsBlockModifier
- AddResidue()
: EntityView
, Diag
, ChainView
, EntityView
- AddResidueRenamingRule()
: Forcefield
- AddRevision()
: MMCifInfoRevisions
, MMCifInfo
, MMCifInfoRevisions
, MMCifInfo
- AddRow()
: Table
- AddSecondaryConnector()
: AtomImpl
- AddSequence()
: SequenceViewObject
, AlignmentHandle
, SequenceListImpl
, ConstSequenceList
, SequenceList
- AddSink()
: MultiLogSink
- AddSphere()
: PrimList
, IndexedVertexArray
- addState()
: StateMachine
- AddStop()
: GradientEdit
- AddString()
: Diag
- AddSymmetricCompound()
: SymmetrySettings
- AddText()
: PrimList
- AddToken()
: PythonContext
- AddTool()
: ToolManager
- AddTorsion()
: EditorBase
, EntityImpl
, ResidueImpl
- AddTrajectory()
: TrajWidget
- addTransition()
: State
- AddTri()
: IndexedVertexArray
, SurfaceImpl
, SurfaceHandle
- AddTriN()
: IndexedVertexArray
- AddUreyBradleyAngle()
: Topology
- AddVertex()
: SurfaceImpl
, SurfaceHandle
- AddView()
: EntityRenderer
, SceneWin
- AddViewMode()
: PanelBar
- AddWidget()
: MainArea
, PanelBar
, PanelManager
, ComboOptionsWidget
, ToolBarOptionsWidget
- AddWidgetByName()
: PanelManager
- AddWidgetToApp()
: GostyApp
- AddWidgetToPool()
: PanelManager
- AdjacencyBitmap()
: AdjacencyBitmap
- AdjustPhaseOrigin()
: ImageStateImpl< T, D >
- AdminRights()
: AdminRights
- AdvanceProgress()
: Progress
- AINDEX
: Prop
- AlgorithmBase()
: AlgorithmBase
- Align()
: AlignmentContextMenu
, ChainMapper
, _Aligner
- align_properties_painter
: SequenceViewObject
- aligned_contacts
: iAlignResult
- aligned_length
: TMAlignResult
, MMAlignResult
- aligned_patches
: BlastHit
- aligned_residues
: iAlignResult
- AlignedColumn()
: AlignedColumn
- AlignedColumnIterator()
: AlignedColumnIterator
- AlignedCuboid()
: AlignedCuboid
- AlignedRegion()
: AlignedRegion
- aligner
: ChainMapper
- alignment
: TMAlignResult
, iAlignResult
, cluster
, MappedLDDTScorer
- ALIGNMENT
: RefMode
- AlignmentChanged()
: SequenceTableView
, SequenceViewer
- AlignmentHandle
: ConstSequenceHandle
, SequenceHandle
, AlignmentHandle
- AlignmentOpts()
: AlignmentOpts
- alignments
: MMAlignResult
, OligoLDDTScorer
, QSscorer
- AlignmentViewObject()
: AlignmentViewObject
- AlignPropertiesPainter()
: AlignPropertiesPainter
- all_chains
: ChainComboBox
- AllCleared()
: MessageWidget
- aln
: AlignedPatch
, HHblitsHit
, Scorer
- alns()
: MappingResult
, ContactScorer
, QSScorer
- Alpha()
: Color
- ALPHA_HELIX
: SecStructure
- ALPHABET_SIZE
: SubstWeightMatrix
- alt_name
: AtomSpec
- ALWAYSTRUE
: EditPositionGuard
- amb_occl_factor
: SceneFX
- amb_occl_flag
: SceneFX
- amb_occl_mode
: SceneFX
- amb_occl_quality
: SceneFX
- amb_occl_size
: SceneFX
- AMBER
: Compound
- AMINOACIDS
: ChemType
- AminoAcidSet()
: AminoAcidSet
- AminoAcidSetIterator()
: AminoAcidSetIterator
- ANAME
: Prop
- anames
: ResidueDefinition
- anchor_idx
: SidechainAtomRule
- ANCHORBIGGER
: EditPositionGuard
- ANCHOREQUAL
: EditPositionGuard
- ANCHORSMALLER
: EditPositionGuard
- ANGL
: Measurement
- angle
: SidechainAtomRule
, FindMemParam
, AngleViolationInfo
- angle_
: Phase
- angle_table
: StereoChemicalProps
- AnisotropicFilter()
: AnisotropicFilter
- anisou
: AtomProp
- anno
: AAIndexData
- anno_type
: AAIndexData
- antecedent_list
: HBondAcceptor
- ANUM
: Prop
- Append()
: SequenceImpl
, SequenceHandle
- AppendCode()
: TextLogger
- AppendColorOp()
: GfxObj
- AppendCommand()
: ShellHistory
- AppendCommandlineArgument()
: PythonInterpreter
- AppendError()
: PythonShellWidget
- AppendModulePath()
: PythonInterpreter
- AppendOutput()
: PythonShellWidget
, TextLogger
- AppendResidue()
: EditorBase
, ChainImpl
- Apply()
: ConstImageHandle
, ImageList
, ConstImageHandle
, ImageHandle
, TraceRendererBase
, Surface
, Transformation
, Surface
, TraceRendererBase
, Scene
, EntityRenderer
, ConnectRendererBase
, Entity
, Transform
, Rotation3
, ImageList
, Transform
, Entity
, ResidueView
, Entity
, GfxNode
, GfxObj
, ConnectRendererBase
, EntityRenderer
, TorsionHandle
, EntityRenderer
, EntityView
, TraceRendererBase
, TorsionImpl
, TraceRendererBase
, Scene
, EntityImpl
, Selection
, Surface
, ChainImpl
, Surface
, ConnectorImpl
, AtomView
, CircleMask
, CompositeMask
, ConstData
, ResidueView
, ResidueHandle
, Data
, ExtentMask
, ImageHandle
, ChainView
, ImageHandle
, BondHandle
, AtomView
, ImageHandle
, InfoGroup
, ConstImageHandle
, BondHandle
, ConstImageHandle
, ImageStateImpl< T, D >
, ImageStateBase
, ChainHandle
, PolygonMask
, ImageList
, AtomHandle
, InfoHandle
, ImageStateBase
, InfoGroup
, ImageStateImpl< T, D >
, InvertedMask
, MaskBase
, NullData
, SphericalMask
, ImageStateImpl< T, D >
, InfoHandle
, ImageStateImpl< T, D >
, ChainView
, EntityHandle
, EntityView
, AtomImpl
, ImageStateBase
, ResidueImpl
, ImageStateBase
- ApplyAxisRotation()
: Transform
- ApplyInverse()
: Transform
- ApplyIP()
: ConstData
, Data
, ImageHandle
, ConstImageHandle
, ImageList
, ImageStateBase
, ImageStateImpl< T, D >
, NullData
, ImageHandle
, ImageList
, ImageStateBase
, ImageStateImpl< T, D >
, ImageList
, ImageStateBase
, ImageHandle
, ImageList
- ApplyLBFGS()
: Simulation
- ApplyOn()
: VisibilityOp
, Preset
, RenderOp
- ApplyOnBuildingBlock()
: TerminiConstructor
, GromacsHydrogenConstructor
, HydrogenConstructor
, BlockModifier
, GromacsBlockModifier
, HeuristicHydrogenConstructor
, HeuristicBlockModifier
- ApplyOnResidue()
: HydrogenConstructor
, TerminiConstructor
, BlockModifier
, GromacsBlockModifier
, GromacsHydrogenConstructor
, HeuristicHydrogenConstructor
, HeuristicBlockModifier
- ApplyOptions()
: RenderModeWidget
, Entity
- ApplyRenderOptions()
: CPKRenderOptions
, LineRenderOptions
, CustomRenderOptions
, TraceRenderOptions
, RenderOptions
, SlineRenderOptions
, CartoonRenderOptions
- ApplySD()
: Simulation
- ApplyShiftToMask()
: MaskOverlay
- ApplyTo()
: EntityViewColorOp
, BasicGradientColorOp
, ByElementColorOp
, MapHandleColorOp
, ByChainColorOp
, UniformColorOp
, GradientLevelColorOp
, ColorOp
- ApplyTransform()
: CoordGroupHandle
, EntityImpl
, XCSEditor
, Vec3List
, XCSEditor
, CoordSource
- ApplyXAxisRotation()
: Transform
- ApplyXAxisTranslation()
: Transform
- ApplyYAxisRotation()
: Transform
- ApplyYAxisTranslation()
: Transform
- ApplyZAxisRotation()
: Transform
- ApplyZAxisTranslation()
: Transform
- arc_spinbox_
: HSCWidget
, TubeWidget
, TraceWidget
, CustomWidget
- AreResiduesConsecutive()
: Processor
- Argand()
: Argand
- As()
: ImageFormatBase
- AsBool()
: InfoItem
- AsFloat()
: InfoItem
- AsImage()
: SimilarityMatrix
- AsInt()
: InfoItem
- Assign()
: GenericPropContainerImpl
- assign_elem
: MolckSettings
- AssignFFSpecificNames()
: Forcefield
- AssignGromacsNaming()
: Modeller
- AssignPDBNaming()
: Modeller
- AssignPreset()
: SubstWeightMatrix
- AssignSecondaryStructure()
: ChainImpl
, ChainHandle
, SecStructContextMenu
- AssignSecStructure()
: MMCifReader
- AssignSSToA3M()
: HHblits
- AsString()
: ResNum
- AsVector()
: InfoItem
- At()
: Mat4
, Mat3
, Plane
, Vec4
- at()
: ContextProfileDB
- At()
: Vec2
, Line3
, Vec4
, Vec3
- at()
: ProfileHandle
- At()
: Point
- at()
: ProfileHandle
- At()
: Vec2
, Line2
, Mat4
, Vec3
, Mat2
, Ellipse2
, Hyperbola2
- AtAngle()
: Ellipse2
- AtEnd()
: ShellHistory
, IndexIterator
, LineIterator
, ExtentIterator
, IndexIterator< D >
, RowSet< R >
- atom
: AtomEntry
, NodeEntry
, SurfaceVertex
- Atom()
: Builder
- atom
: AtomGroupEntry
- ATOM
: Prop
- atom
: HBondAcceptor
- atom1
: BondEntry
- atom2
: BondEntry
- atom_a
: Contact
- atom_b
: Contact
- atom_indices
: lDDTScorer
- atom_map
: GfxView
- atom_names
: CustomCompound
- atom_one
: BondSpec
- atom_two
: BondSpec
- AtomBase()
: AtomBase
- AtomEntry()
: AtomEntry
- AtomGroupEntry()
: AtomGroupEntry
- AtomHandle()
: AtomHandle
- AtomImpl()
: AtomImpl
- AtomProp()
: AtomProp
- AtomRenamingType
: Forcefield
- atoms
: AtomGroup
, BondTableEntry< ATOM >
- AtomSpec()
: AtomSpec
- AtomView()
: AtomView
, EntityView
- AtStart()
: ExtentIterator
, IndexIterator
- Attach()
: SurfaceHandle
, SurfaceImpl
, SurfaceHandle
, NullData
, SurfaceImpl
, ImageHandle
, ConstImageHandle
, Observable
, OverlayManager
, ConstData
- AttachGfxObject()
: SequenceViewObject
- AttachObserver()
: EntityImpl
, EntityHandle
, Scene
, SceneObserverImpl
- AttachRenderModeObserver()
: SceneWinModel
- AttachView()
: SequenceImpl
, SequenceHandle
, AlignmentHandle
, SequenceImpl
- au_chains
: BUInfo
- authors
: AAIndexData
- auto_
: ClipWidget
- auto_calc_
: GradientLevelColorOpWidget
- AutoAutoslab()
: Scene
- AutoCorrelateFnc()
: AutoCorrelateFnc
- automatic_transitions_
: State
- AutomaticTransition()
: AutomaticTransition
- Autoslab()
: Scene
- AutoslabMax()
: Scene
- available
: PooledWidget
- AVG_BFACTORS
: OMF
- awake_
: PythonInterpreterWorker
- AX
: Prop
- axis
: FindMemParam
- AY
: Prop
- AZ
: Prop