- p -

• PagedArray() : PagedArray< T, P >
• Paint() : AlignPropertiesPainter , ConservationPainter , SeqTextPainter , TickPainter , Painter
• paint() : SequenceDelegate
• Paint() : BackgroundPainter , SeqSecStrPainter , SeqSelectionPainter
• PaintBackground() : LevelPreview
• PaintBins() : LevelPreview
• Painter() : Painter
• paintEvent() : Gutter , SeqSearchBar , ColorSelectWidget , GradientPreview , LevelPreview , Argand , DataViewerPanelBase
• paintGL() : GLCanvas
• PaintLevel() : LevelPreview
• PaintMouse() : LevelPreview
• PairDist() : QSEntity
• PairedTTest() : Table
• PairSubstWeightMatrix() : PairSubstWeightMatrix
• PanelBar() : PanelBar
• PanelBarWidgetHolder() : PanelBarWidgetHolder
• PanelManager() : PanelManager
• PanelWidgetContainer() : PanelWidgetContainer
• parent() : SceneWinModel
• ParentDataObserver() : ParentDataObserver
• Parse() : PythonContextParser , StarParser , AAIndexData
• ParseAndAddAtom() : MMCifReader
• ParseAtomIdent() : MMCifReader
• ParseCitation() : MMCifReader
• ParseCitationAuthor() : MMCifReader
• ParseDatabasePDBRev() : MMCifReader
• ParseEm3DReconstruction() : MMCifReader
• ParseEntity() : MMCifReader
• ParseEntityPoly() : MMCifReader
• ParseEntityPolySeq() : MMCifReader
• ParseExptl() : MMCifReader
• ParsePdbxAuditRevisionDetails() : MMCifReader
• ParsePdbxAuditRevisionHistory() : MMCifReader
• ParsePdbxDatabasePdbObsSpr() : MMCifReader
• ParsePdbxDatabaseStatus() : MMCifReader
• ParsePdbxEntityBranch() : MMCifReader
• ParsePdbxEntityBranchLink() : MMCifReader
• ParsePdbxStructAssembly() : MMCifReader
• ParsePdbxStructAssemblyGen() : MMCifReader
• ParsePdbxStructOperList() : MMCifReader
• ParseRefine() : MMCifReader
• ParseStruct() : MMCifReader
• ParseStructConf() : MMCifReader
• ParseStructRef() : MMCifReader
• ParseStructRefSeq() : MMCifReader
• ParseStructRefSeqDif() : MMCifReader
• ParseStructSheetRange() : MMCifReader
• Paste() : ImageHandle
• PasteFnc() : PasteFnc
• PasteRotation() : Mat4
• PasteTranslation() : Mat4
• patch_dockq() : Scorer
• patch_qs() : Scorer
• PathCompleter() : PathCompleter
• pathFromIndex() : PythonCompleter
• PDBize() : PDBize
• PDBReader() : PDBReader
• PDBWriter() : PDBWriter
• Peak() : Peak
• pepnuc_aln() : Scorer
• per_interface_ics() : Scorer
• per_interface_ics_precision() : Scorer
• per_interface_ics_recall() : Scorer
• per_interface_ips() : Scorer
• per_interface_ips_precision() : Scorer
• per_interface_ips_recall() : Scorer
• per_interface_qs_best() : Scorer
• per_interface_qs_global() : Scorer
• PerceiveRings() : RingFinder
• Percentiles() : Table
• Perspective() : Perspective
• Phase() : Phase
• Pick() : Scene
• PickAtom() : Entity , ConnectRendererBase , EntityRenderer , TraceRendererBase , Scene
• PickBond() : Entity , ConnectRendererBase , EntityRenderer , TraceRendererBase
• Pixel() : RasterImage::Pixel
• PixelSampling() : PixelSampling
• Plane() : Plane
• Plot() : Table
• PlotBar() : Table
• PlotEnrichment() : Table
• PlotHexbin() : Table
• PlotHistogram() : Table
• PlotLogROC() : Table
• PlotROC() : Table
• PNG() : PNG
• PodVector() : PodVector< T >
• Point() : Point
• Point2Coord() : PixelSampling
• Point2Index() : FrequencyDomain , HalfFrequencyDomain , SpatialDomain
• Point2Offset() : Extent
• pointer_it() : pointer_it< T >
• PointList() : PointList
• PointlistOverlay() : PointlistOverlay
• PointlistOverlayBase() : PointlistOverlayBase
• PointlistOverlayBaseSettings() : PointlistOverlayBaseSettings
• PointToWin() : DataViewerPanelBase
• Polar() : Polar
• Polygon2() : Polygon2
• PolygonMask() : PolygonMask
• polynuc_seqs() : ChainMapper
• polypep_seqs() : ChainMapper
• PooledWidget() : PooledWidget
• Pop() : SymmetryOp
• pop_back() : PodVector< T >
• PopFile() : Logger
• PopProgram() : Shader
• PopSink() : Logger
• PopVerbosityLevel() : Logger
• PopView() : Scene
• Postprocess() : SceneFX
• PotentialInteraction() : QSEntity
• pov() : PovState
• PovState() : PovState
• PowerSpectrumFnc() : PowerSpectrumFnc
• PowFnc() : PowFnc
• PQRReader() : PQRReader
• PQRWriter() : PQRWriter
• precision() : ContactScorerResultICS , ContactScorerResultIPS
• PreGLInit() : Shader
• Prepare() : Database
• PrepareColoring() : ByEntityWidget
• PreparedStatement() : PreparedStatement
• PrepareRendering() : ConnectRendererBase , SlineRenderer , EntityRenderer , CartoonRenderer , CPKRenderer , CustomRenderer , DebugRenderer , LineTraceRenderer , SimpleRenderer , TraceRenderer , TraceRendererBase
• PrepList() : BackboneTrace
• Preprocess() : SceneFX
• PreRenderGL() : GfxObj
• Primitive() : Primitive
• PrimList() : PrimList
• Print() : PythonContext , PythonContextParser
• print_report() : _XMLTestResult , _TestInfo
• PrintAllDistances() : ClashingDistances
• PrintAllParameters() : StereoChemicalParams
• PrintParameters() : lDDTSettings
• PrintPerResidueStats() : lDDTScorer
• Process() : Processor , MMPreprocessor
• ProcessEvents() : GostyApp
• ProcessLimits() : GfxObj , PrimList
• Processor() : Processor
• ProcessStructure() : ChainMapper
• ProcessUnkAtoms() : RuleBasedProcessor
• ProcessUnkResidue() : HeuristicProcessor , RuleBasedProcessor
• Profile() : Profile
• profile_length() : ContextProfileDB
• ProfileColumn() : ProfileColumn
• ProfileHandle() : ProfileHandle
• Project() : Scene
• Prop() : Prop , PropertyError
• PropertyError() : PropertyError
• ProvidesExport() : MapIOIPLHandler , MapIONanoscopeHandler , EntityIOSDFHandler , EntityIOPDBHandler , EntityIOMMCIFHandler , EntityIOCRDHandler , HhmIOHandler , MapIOMrcHandler , EntityIOMMCIFHandler , MapIOTiffHandler , HhmIOHandler , MapIODatHandler , FastaIOHandler , EntityIOMAEHandler , EntityIOPQRHandler , DF3MapIOHandler , MapIODm3Handler , MapIODxHandler , EntityIOHandlerFactoryBase , ClustalIOHandler , MapIOSitusHandler , DF3MapIOHandler , MapIOIPLHandler , MapIOMrcHandler , MapIONanoscopeHandler , MapIOSitusHandler , MapIOHandlerFactoryBase , EntityIOHandlerFactoryBase , EntityIOPQRHandler , PirIOHandler , ProfileIOHandlerFactoryBase , PromodIOHandler , PirIOHandler , ClustalIOHandler , ProfileIOHandlerFactoryBase , PssmIOHandler , SequenceIOHandlerFactoryBase , MapIODatHandler , SurfaceIOHandlerFactoryBase , MapIOHandlerFactoryBase , MapIODxHandler , SurfaceIOMSMSHandler , PromodIOHandler , MapIOPngHandler , SequenceIOHandlerFactoryBase , FastaIOHandler , EntityIOCRDHandler , MapIOTiffHandler , EntityIOPDBHandler , PssmIOHandler , EntityIOSDFHandler , SurfaceIOMSMSHandler , SurfaceIOHandlerFactoryBase , EntityIOMAEHandler , MapIOSpiHandler , MapIOPngHandler , MapIODm3Handler , MapIOSpiHandler
• ProvidesImport() : MapIOIPLHandler , PssmIOHandler , EntityIOPQRHandler , EntityIOMMCIFHandler , MapIOSpiHandler , PromodIOHandler , DF3MapIOHandler , MapIOHandlerFactoryBase , FastaIOHandler , EntityIOPQRHandler , MapIOTiffHandler , SequenceIOHandlerFactoryBase , MapIOSitusHandler , PirIOHandler , MapIOIPLHandler , MapIOPngHandler , EntityIOMAEHandler , MapIODxHandler , MapIODm3Handler , EntityIOMMCIFHandler , MapIODatHandler , PssmIOHandler , EntityIOSDFHandler , EntityIOHandlerFactoryBase , MapIOMrcHandler , ProfileIOHandlerFactoryBase , SurfaceIOMSMSHandler , HhmIOHandler , MapIODatHandler , MapIOMrcHandler , EntityIOPDBHandler , DF3MapIOHandler , EntityIOMAEHandler , ProfileIOHandlerFactoryBase , MapIOSpiHandler , PromodIOHandler , SurfaceIOHandlerFactoryBase , MapIONanoscopeHandler , ClustalIOHandler , EntityIOCRDHandler , PirIOHandler , MapIODxHandler , MapIOHandlerFactoryBase , MapIONanoscopeHandler , SequenceIOHandlerFactoryBase , HhmIOHandler , SurfaceIOMSMSHandler , MapIODm3Handler , MapIOPngHandler , EntityIOHandlerFactoryBase , SurfaceIOHandlerFactoryBase , EntityIOCRDHandler , MapIOTiffHandler , EntityIOSDFHandler , MapIOSitusHandler , EntityIOPDBHandler , ClustalIOHandler
• Prune() : EditorBase
• Ptr() : PtrObserver< T >
• PtrObserver() : PtrObserver< T >
• Push() : StarWriter , SymmetryOp
• push_back() : PagedArray< T, P > , PodVector< T >
• PushFile() : Logger
• PushProgram() : Shader
• PushSink() : Logger
• PushVerbosityLevel() : Logger
• PushView() : Scene
• PyShell() : PythonShell
• PythonCompleter() : PythonCompleter
• PythonContext() : PythonContext
• PythonContextParser() : PythonContextParser
• PythonInterpreter() : PythonInterpreter
• PythonInterpreterWorker() : PythonInterpreterWorker
• PythonShell() : PythonShell
• PythonShellTextDocumentLayout() : PythonShellTextDocumentLayout
• PythonShellWidget() : PythonShellWidget
• PythonSyntaxHighlighter() : PythonSyntaxHighlighter
• PythonToken() : PythonToken
• PythonTokenizer() : PythonTokenizer