Here is a list of all struct and union fields with links to the structures/unions they belong to:

- g -

• g : RasterImage::Pixel , Units
• gap_extension_penalty : AlignmentOpts
• gap_open_penalty : AlignmentOpts
• GaussianFilterBase() : GaussianFilterBase
• GaussianGradientMagnitudeFilterBase() : GaussianGradientMagnitudeFilterBase
• GaussianHighPassFilter() : GaussianHighPassFilter
• GaussianLaplacianFilterBase() : GaussianLaplacianFilterBase
• GaussianLowPassFilter() : GaussianLowPassFilter
• GaussianSmooth() : Table
• gdt_ha : GDTResult , TMScoreResult
• gdt_ts : GDTResult , TMScoreResult
• generate_disulfid_bonds : Settings
• GenerateDisulfidBonds() : Modeller
• GenericProp() : GenericPropContainerImpl
• GenericPropContainer< SequenceHandle > : SequenceHandle
• GenericPropContainerImpl() : GenericPropContainerImpl
• GenericPropError() : GenericPropError
• GenProp() : GenProp
• GeomException() : GeomException
• Get() : EntityPropertyMapper , Dist2Mean , TriMatrix< T > , RemoteRepository
• get() : AdjacencyBitmap
• Get() : IOProfileRegistry , EntityPropertyMapper
• get_intercept_x_values_() : PolygonMask
• GetA() : Ellipse2 , Hyperbola2 , ButterworthLowPassFilter
• GetAbsoluteOrigin() : ImageHandle , ConstImageHandle , ImageStateBase , ImageStateImpl< T, D >
• GetAddRuleAnchors() : GromacsBlockModifier
• GetAddRuleCharge() : GromacsBlockModifier
• GetAddRuleMethod() : GromacsBlockModifier
• GetAddRuleNames() : GromacsBlockModifier
• GetAddRuleNumber() : GromacsBlockModifier
• GetAddRuleType() : GromacsBlockModifier
• GetAdjMap() : Domains
• GetAdjustedClashingDistance() : ClashingDistances
• GetAdjustedReferenceDistance() : ClashEvent
• GetAlgorithmName() : ConjFnc , ExplicitConvoluteFnc , ExplicitCorrelateFnc , SliceFnc , DiscreteShrinkFnc , FFTFnc , GaussianFilterBase , GaussianGradientMagnitudeFilterBase , GaussianLaplacianFilterBase , HighestPeakSearch3DBase , HistogramBase , LineAverageBase , LocalSigmaThresholdBase , MaskImageBase , PowerSpectrumFnc , RandomizeFnc , SmoothMaskImageBase , StatBase , StatMinMaxBase , CosFnc , ExpFnc , LogFnc , Log10Fnc , SinFnc , SqrtFnc , TanFnc , PowFnc , NormalizeFnc , PasteFnc , MirrorFnc , ShiftFnc , TransformFnc , AutoCorrelateFnc
• GetAlignedLength() : TMAlignResult
• GetAlignedSeq() : MMCifInfoStructRef
• GetAlignedSeqs() : MMCifInfoStructRef
• GetAlignment() : TMAlignResult , QSscoreEntity
• GetAlignmentHandle() : AlignedRegion
• GetAllowedRange() : StereoChemicalBondViolation , StereoChemicalAngleViolation
• GetAlphaHelixContent() : CoordFrame
• GetAltAtomBFactor() : ResidueImpl
• GetAltAtomGroupNames() : ResidueImpl , ResidueHandle
• GetAltAtomOcc() : ResidueImpl
• GetAltAtomPos() : ResidueImpl , ResidueHandle
• GetAltBFactor() : AtomBase
• GetAltGroupNames() : AtomBase
• GetAltOcc() : AtomBase
• GetAltPos() : AtomBase
• GetAngle() : Quat , CoordFrame , EntityHandle , EntityView , EntityImpl , TorsionImpl , Forcefield , TorsionHandle
• GetAngleCount() : StereoChemistryInfo
• GetAngleICS() : Dihedral , EntityImpl
• GetAngles() : BuildingBlock , GromacsBlockModifier , QSscoreEntity
• GetAngleViolationList() : StereoChemistryInfo
• GetAngleWidth() : StereoChemicalAngleViolation
• GetAngleXCS() : Dihedral , EntityImpl
• GetAnisou() : AtomBase , AtomImpl
• GetArea() : Rectangle2 , Polygon2 , Ellipse2 , Circle2
• GetAssemblies() : LinearIndexer
• GetAssignTorsions() : Processor
• GetAtom() : Diag , FragmentImpl
• GetAtomCount() : ChainHandle , ChainView , CoordGroupHandle , CoordSource , EntityHandle , EntityView , ChainImpl , EntityImpl , ResidueImpl , ResidueHandle , ResidueView
• GetAtomList() : ChainHandle , CoordGroupHandle , CoordSource , EntityHandle , EntityView , ResidueImpl , ResidueHandle , ResidueView
• GetAtomName() : UniqueAtomIdentifier
• GetAtomPos() : CoordFrame , CoordGroupHandle , CoordSource
• GetAtomPosList() : EntityHandle
• GetAtomProps() : SelNode
• GetAtomRenaming() : Forcefield
• GetAtomRenamingRules() : Forcefield
• GetAtoms() : BuildingBlock , Interaction , NotConnectedError
• GetAtomSpecIndex() : Compound
• GetAtomSpecs() : Compound
• GetAtomType() : Forcefield
• GetAttachedView() : SequenceImpl , ConstSequenceHandle , SequenceHandle
• GetAuthorList() : MMCifInfoCitation
• GetAvailableAlignmentHandler() : IOManager
• GetAvailableEntityHandler() : IOManager
• GetAvailableProfileHandler() : IOManager
• GetAvailableSurfaceHandler() : IOManager
• GetAverage() : Distances
• GetAverageBFactor() : ResidueImpl
• GetAverageEntropy() : ProfileHandle
• GetAverageOffset() : ClashingInfo
• GetAverageScore() : ProfileHandle
• GetAvgBondLengthInfo() : StereoChemistryInfo
• GetAvgLength() : BondLengthInfo
• GetAvgZscore() : BondLengthInfo
• GetAvgZscoreAngles() : StereoChemistryInfo
• GetAvgZscoreBonds() : StereoChemistryInfo
• GetAxis() : Quat , QSscoreEntity
• GetAxisA() : Cuboid
• GetAxisB() : Cuboid
• GetAxisC() : Cuboid
• GetB() : Ellipse2 , Hyperbola2
• GetBadAngleCount() : StereoChemistryInfo
• GetBadBondCount() : StereoChemistryInfo
• GetBasedir() : MMPreprocessor
• GetBFactor() : AtomBase , AtomImpl
• GetBins() : HistogramBase
• GetBioUnits() : MMCifInfo
• GetBitDepth() : DAT , IPL , MRC , TIF , DAT , IPL , MRC , TIF
• GetBlockModifier() : Forcefield
• GetBlockModifierType() : HydrogenConstructor , TerminiConstructor , BlockModifier , GromacsHydrogenConstructor , GromacsBlockModifier , HeuristicHydrogenConstructor , HeuristicBlockModifier
• GetBlocksize() : DiscreteShrinkFnc
• getBody() : DensityForce
• GetBond() : Forcefield
• GetBondCount() : StereoChemistryInfo , AtomHandle , AtomView , ChainHandle , ChainView , EntityHandle , EntityView , ChainImpl , EntityImpl , ResidueImpl , ResidueHandle
• GetBondLength() : StereoChemicalBondViolation
• GetBondList() : AtomHandle , AtomView , EntityHandle , EntityView , EntityImpl
• GetBondOrder() : BondHandle , ConnectorImpl
• GetBondPartners() : AtomHandle , AtomView
• GetBonds() : BuildingBlock , GromacsBlockModifier
• GetBondSpecs() : Compound
• GetBondViolationList() : StereoChemistryInfo
• GetBookPublisher() : MMCifInfoCitation
• GetBookPublisherCity() : MMCifInfoCitation
• GetBoolProp() : ConstGenericPropContainer< H >
• GetBoundingBox() : Polygon2 , Ellipse2
• GetBoundObject() : QueryState
• GetBounds() : ChainHandle , ChainView , EntityHandle , EntityView , ChainImpl , EntityImpl , ResidueImpl , ResidueHandle , ResidueView
• GetBuildingBlock() : Forcefield
• GetBuildingBlockNames() : Forcefield
• GetCAS() : MMCifInfoCitation
• GetCASPFlag() : MMCifInfoStructDetails
• GetCategory() : StarDataItem , StarLoopDesc , StarDataItem , StarLoopDesc
• GetCellAngles() : CoordFrame
• GetCellSize() : CoordFrame
• GetCellVectors() : CoordFrame
• GetCenter() : AlignedCuboid , Circle2 , Cuboid , PointCloud , Transform , Vec3List , Extent , WithinParam
• GetCenterOfAtoms() : ChainHandle , ChainView , EntityHandle , EntityView , ChainImpl , EntityImpl , ResidueImpl , ResidueHandle , ResidueView
• GetCenterOfMass() : StatBase , ChainHandle , ChainView , EntityHandle , EntityView , ChainImpl , EntityImpl , ResidueImpl , ResidueHandle , ResidueView
• GetCenterOfMassPos() : CoordFrame
• GetCentralAtom() : ResidueImpl , ResidueBase
• GetCentralNormal() : ResidueImpl , ResidueBase
• GetCentroid() : Polygon2
• GetChain() : Diag , EntityImpl , ResidueImpl , ResidueHandle , ResidueView
• GetChainCount() : EntityHandle , EntityView , EntityImpl
• GetChainIntervalList() : MMCifInfoBioUnit
• GetChainIter() : EntityImpl
• GetChainLengths() : LinearIndexer
• GetChainList() : MMCifInfoBioUnit , EntityHandle , EntityView , EntityImpl
• GetChainName() : MMCifInfoStructRefSeq , UniqueAtomIdentifier
• GetChainNames() : LinearIndexer
• GetChainView1() : _CachedRMSD
• GetChainView2() : _CachedRMSD
• GetCharacter() : LinearCharacterContainer
• GetCharacters() : LinearCharacterContainer
• GetCharge() : AtomBase , AtomImpl , BuildingBlock , Topology
• GetCharges() : BuildingBlock , Topology
• GetCheckBondFeasibility() : Processor
• GetCheckedValue() : ImageStateImpl< T, D >
• GetChemClass() : Compound , ResidueImpl , ResidueBase
• GetChemType() : Compound , ResidueImpl , ResidueBase
• GetCircumference() : Circle2
• GetCitations() : MMCifInfo
• GetCitationType() : MMCifInfoCitation
• GetClashCount() : ClashingInfo
• GetClashingDistance() : ClashingDistances
• GetClashList() : ClashingInfo
• GetCMap() : Forcefield
• GetCMapIndices() : Topology
• GetCMapParameters() : Topology
• GetCMaps() : BuildingBlock , Topology
• GetCmaps() : GromacsBlockModifier
• GetCol() : Mat3
• GetColIndex() : Table
• GetColNames() : Table
• GetColumns() : ProfileHandle
• GetComplex() : ConstData , ImageHandle , ConstImageHandle , ImageStateBase , FrequencyDomain , HalfFrequencyDomain , ImageStateImpl< T, D > , SpatialDomain , NullData
• GetComponents() : Domains
• GetCompOP() : SelNode
• GetConnect() : Processor
• GetConnectAminoAcids() : Processor
• GetConnectorCount() : AtomImpl
• GetConstraint() : Forcefield
• GetConstraints() : BuildingBlock
• GetCount() : BondLengthInfo , AlignmentHandle , SequenceListImpl , ConstSequenceList , SequenceList
• GetCoverage() : AlignmentHandle , SequenceListImpl
• GetCreationDate() : Compound , CompoundLib
• GetCTerModifier() : Forcefield
• GetCurrentAltGroupName() : ResidueImpl , ResidueHandle
• GetCurrentLinenum() : StarParser
• GetCurrentSink() : Logger
• GetData() : ValueHolder< V >
• GetDataElement() : Distances
• GetDataPtr() : RasterImage
• GetDataRange() : LinearIndexer
• GetDataSize() : Distances
• GetDataType() : ValueHolder< V >
• GetDate() : MMCifInfoObsolete , MMCifInfoRevisions , MMCifInfoObsolete , MMCifInfoRevisions
• GetDateOriginal() : MMCifInfoRevisions
• GetDBAccess() : MMCifInfoStructRef
• GetDBBegin() : MMCifInfoStructRefSeq
• GetDBEnd() : MMCifInfoStructRefSeq
• GetDBID() : MMCifInfoStructRef
• GetDBName() : MMCifInfoStructRef
• GetDBRNum() : MMCifInfoStructRefSeqDif
• GetDefault() : IOProfileRegistry
• GetDefaultLib() : Conopology
• getDefaultParameters() : DensityForceImpl
• GetDefaultProps() : AtomProp
• GetDefaultQueryFlags() : EntityHandle , EntityImpl
• GetDeleteAtoms() : GromacsBlockModifier
• GetDeletions() : InsDel
• GetDelta() : CoordGroupHandle
• getDensity() : DensityForce
• GetDensity() : Topology
• GetDensityBodies() : Topology
• GetDensityResolution() : Topology
• GetDensityScaling() : Topology
• GetDepth() : Extent , Size
• GetDescription() : ChainBase , ChainImpl
• GetDescriptor() : MMCifInfoStructDetails
• GetDetails() : MMCifInfoBioUnit , MMCifInfoStructRefSeqDif , MMCifInfoBioUnit , MMCifInfoStructRefSeqDif
• GetDialect() : Compound
• GetDialectAsString() : Compound
• GetDifs() : MMCifInfoStructRefSeq
• GetDihedralAngle() : CoordFrame
• GetDihedrals() : BuildingBlock , Forcefield , GromacsBlockModifier
• GetDim() : Extent , Size
• GetDir() : ConnectorImpl
• GetDirection() : Line2 , Line3
• GetDistanceBetwAtoms() : CoordFrame
• GetDistanceBetwCenterOfMass() : CoordFrame
• GetDistanceConstraintIndex() : Topology
• GetDistanceConstraintIndices() : Topology
• GetDistanceConstraintParameters() : Topology
• GetDistanceConstraints() : Topology
• GetDistances() : DistanceMap
• GetDOI() : MMCifInfoCitation
• GetDomain() : ConstData , ImageHandle , ConstImageHandle , ImageStateBase , FrequencyDomain , HalfFrequencyDomain , ImageStateImpl< T, D > , SpatialDomain , NullData
• GetDomains() : Domains
• GetElement() : AtomBase , AtomImpl
• GetEnd() : Rectangle2 , Extent , ExtentIterator , ValueHolder< V > , AlignedRegion
• GetEndianess() : DAT
• GetEndianessOnSave() : MRC , Spider , MRC , Spider
• GetEnergy() : Simulation
• GetEntity() : AtomHandle , AtomView , ChainHandle , ChainView , CoordGroupHandle , CoordSource , EditorBase , AtomImpl , ChainImpl , ResidueImpl , Simulation , QueryViewWrapper , ResidueHandle , ResidueView
• GetEntityID() : MMCifInfoStructRef
• GetEntityView() : QueryViewWrapper
• GetEntropy() : ProfileColumn
• GetEntryID() : MMCifInfoStructDetails
• GetEps() : ButterworthLowPassFilter
• GetEpsilon() : Topology
• GetEpsilons() : Topology
• GetErrorDescription() : QueryImpl , Query
• GetException() : TerminiExceptions
• GetExclusions() : BuildingBlock , Topology
• GetExtent() : CuboidAxis , ConstData , ExtentIterator , ImageHandle , ConstImageHandle , ImageStateBase , FrequencyDomain , HalfFrequencyDomain , ImageStateImpl< T, D > , SpatialDomain , NullData
• GetFGMDHBondAcceptorIndices() : Topology
• GetFGMDHBondAcceptorParameters() : Topology
• GetFGMDHBondAcceptors() : Topology
• GetFGMDHBondDonorIndices() : Topology
• GetFGMDHBondDonorParameters() : Topology
• GetFGMDHBondDonors() : Topology
• GetFibonacciX() : DSSPAccessibilityParam
• GetFibonacciY() : DSSPAccessibilityParam
• GetFibonacciZ() : DSSPAccessibilityParam
• GetFirst() : BondHandle , ConnectorImpl , Dihedral , TorsionHandle
• GetFirstAtom() : ClashEvent , StereoChemicalBondViolation , StereoChemicalAngleViolation
• GetFirstNonGap() : SequenceImpl , ConstSequenceHandle , SequenceHandle
• GetFirstRelease() : MMCifInfoRevisions
• GetFixElement() : RuleBasedProcessor
• GetFlags() : QueryViewWrapper
• GetFloatProp() : ConstGenericPropContainer< H >
• GetFloatProperty() : AtomBase , AtomImpl , ResidueImpl , ResidueBase
• GetForcefield() : FFReader
• GetForces() : Simulation
• GetFormat() : TIF
• GetFormatDescription() : ClustalIOHandler , EntityIOCRDHandler , EntityIOHandlerFactoryBase , EntityIOMAEHandler , EntityIOMMCIFHandler , EntityIOPDBHandler , EntityIOPQRHandler , EntityIOSDFHandler , FastaIOHandler , HhmIOHandler , MapIODatHandler , DF3MapIOHandler , MapIODm3Handler , MapIODxHandler , MapIOHandlerFactoryBase , MapIOIPLHandler , MapIOJpkHandler , MapIOMrcHandler , MapIONanoscopeHandler , MapIOPngHandler , MapIOSitusHandler , MapIOSpiHandler , MapIOTiffHandler , MapIODatHandler , DF3MapIOHandler , MapIODm3Handler , MapIODxHandler , MapIOHandlerFactoryBase , MapIOIPLHandler , MapIOJpkHandler , MapIOMrcHandler , MapIONanoscopeHandler , MapIOPngHandler , MapIOSitusHandler , MapIOSpiHandler , MapIOTiffHandler , EntityIOCRDHandler , EntityIOHandlerFactoryBase , EntityIOMAEHandler , EntityIOMMCIFHandler , EntityIOPDBHandler , EntityIOPQRHandler , EntityIOSDFHandler , SurfaceIOHandlerFactoryBase , SurfaceIOMSMSHandler , PirIOHandler , ProfileIOHandlerFactoryBase , PromodIOHandler , PssmIOHandler , ClustalIOHandler , FastaIOHandler , HhmIOHandler , PirIOHandler , ProfileIOHandlerFactoryBase , PromodIOHandler , PssmIOHandler , SequenceIOHandlerFactoryBase , SurfaceIOHandlerFactoryBase , SurfaceIOMSMSHandler
• GetFormatName() : ClustalIOHandler , EntityIOCRDHandler , EntityIOHandlerFactoryBase , EntityIOMAEHandler , EntityIOMMCIFHandler , EntityIOPDBHandler , EntityIOPQRHandler , EntityIOSDFHandler , FastaIOHandler , HhmIOHandler , MapIODatHandler , DF3MapIOHandler , MapIODm3Handler , MapIODxHandler , MapIOHandlerFactoryBase , MapIOIPLHandler , MapIOJpkHandler , MapIOMrcHandler , MapIONanoscopeHandler , MapIOPngHandler , MapIOSitusHandler , MapIOSpiHandler , MapIOTiffHandler , MapIODatHandler , DF3MapIOHandler , MapIODm3Handler , MapIODxHandler , MapIOHandlerFactoryBase , MapIOIPLHandler , MapIOJpkHandler , MapIOMrcHandler , MapIONanoscopeHandler , MapIOPngHandler , MapIOSitusHandler , MapIOSpiHandler , MapIOTiffHandler , EntityIOCRDHandler , EntityIOHandlerFactoryBase , EntityIOMAEHandler , EntityIOMMCIFHandler , EntityIOPDBHandler , EntityIOPQRHandler , EntityIOSDFHandler , SurfaceIOHandlerFactoryBase , SurfaceIOMSMSHandler , PirIOHandler , ProfileIOHandlerFactoryBase , PromodIOHandler , PssmIOHandler , ClustalIOHandler , FastaIOHandler , HhmIOHandler , PirIOHandler , ProfileIOHandlerFactoryBase , PromodIOHandler , PssmIOHandler , SequenceIOHandlerFactoryBase , SurfaceIOHandlerFactoryBase , SurfaceIOMSMSHandler
• GetFormatString() : ImageFormatBase
• GetFormattedMessage() : QueryError
• GetFormula() : Compound
• GetFourth() : Dihedral , TorsionHandle
• GetFrame() : CoordGroupHandle , CoordSource , InMemCoordSource
• GetFrame2() : CoordGroupHandle
• GetFrameCount() : CoordGroupHandle , CoordSource , InMemCoordSource
• GetFrameDelta() : CoordSource
• GetFramePositions() : CoordGroupHandle
• GetFreeD() : Domains
• GetFreeS() : Domains
• GetFreq() : ProfileColumn
• GetFrequencySampling() : ConstData , PixelSampling
• GetFudgeLJ() : Forcefield , Topology
• GetFudgeQQ() : Forcefield , Topology
• GetFuncType() : Interaction
• GetGallery() : ImageList
• GetGamma() : Ellipse2 , Hyperbola2
• GetGaplessString() : SequenceImpl , ConstSequenceHandle , SequenceHandle
• GetGBSARadii() : Topology
• GetGBSARadius() : Topology
• GetGeometry() : LineAverageBase
• GetGlobalScore() : lDDTScorer
• GetHalf() : Size
• GetHalfExtent() : CuboidAxis
• GetHalfExtents() : Cuboid
• GetHandle() : AtomHandle , AtomView , ChainHandle , ChainView , EntityHandle , EntityView , ResidueHandle , ResidueView
• GetHarmonicAngleIndices() : Topology
• GetHarmonicAngleParameters() : Topology
• GetHarmonicAngles() : Topology
• GetHarmonicBondIndices() : Topology
• GetHarmonicBondParameters() : Topology
• GetHarmonicBonds() : Topology
• GetHarmonicDistanceRestraintIndices() : Topology
• GetHarmonicDistanceRestraintParameters() : Topology
• GetHarmonicDistanceRestraints() : Topology
• GetHarmonicImproperIndices() : Topology
• GetHarmonicImproperParameters() : Topology
• GetHarmonicImpropers() : Topology
• GetHarmonicPositionRestraintIndices() : Topology
• GetHarmonicPositionRestraintParameters() : Topology
• GetHarmonicPositionRestraints() : Topology
• GetHashCode() : AtomHandle , AtomView , BondHandle , ResidueHandle
• GetHeader() : lDDTLocalScore
• GetHeight() : Rectangle2 , Extent , RasterImage , Size
• GetHydrogenConstructor() : Forcefield
• GetHydrogenRuleAnchors() : GromacsHydrogenConstructor
• GetHydrogenRuleMethod() : GromacsHydrogenConstructor
• GetHydrogenRuleNames() : GromacsHydrogenConstructor
• GetHydrogenRuleNumber() : GromacsHydrogenConstructor
• GetHydrogens() : Checker
• GetID() : Compound , MMCifInfoTransOp , MMCifInfoBioUnit , MMCifInfoCitation , MMCifInfoObsolete , MMCifInfoStructRef , MMCifInfoStructRefSeq , MMCifInfoTransOp , MMCifInfoBioUnit , MMCifInfoCitation , MMCifInfoObsolete , MMCifInfoStructRef , MMCifInfoStructRefSeq
• GetImageStack() : ImageList
• GetImpl() : ConstGenericPropContainer< H >
• GetImplementation() : Normalizer
• GetImplicitGenborn() : Forcefield
• GetImpropers() : BuildingBlock , Forcefield , GromacsBlockModifier
• GetInchi() : Compound
• GetInchiKey() : Compound
• GetIndex() : ConstSequenceHandle , AtomImpl , StarLoopDesc , AtomBase , ChainImpl , ResidueImpl , ResidueHandle , ResidueView , AlignedColumn , SequenceImpl , ProfileColumn , SequenceHandle
• GetIndexForResNum() : ChainImpl
• GetInertia() : Vec3List
• GetInfo() : MMCifReader
• GetInsCode() : ResNum
• GetInsertions() : InsDel
• GetInstance() : NACCESSAccessibilityParam , DSSPAccessibilityParam
• GetIntpolComplex() : ImageStateImpl< T, D > , ImageStateBase , ConstImageHandle , ConstData , ImageHandle , ConstImageHandle , ImageStateBase , ImageStateImpl< T, D > , NullData
• GetIntpolReal() : ConstImageHandle , ImageStateImpl< T, D > , ImageHandle , ConstData , ImageHandle , ConstImageHandle , ImageStateBase , ImageStateImpl< T, D > , NullData
• GetIntProp() : ConstGenericPropContainer< H >
• GetIntProperty() : AtomBase , AtomImpl , ResidueImpl , ResidueBase
• GetInvertedMatrix() : Transform
• GetInvTransformationMatrix() : EntityHandle
• GetISBN() : MMCifInfoCitation
• GetIterator() : ImageHandle , ConstImageHandle
• GetJsonString() : VarianceMap , Dist2Mean
• getKernelNames() : DensityForceImpl
• GetKey() : ResidueImpl , ResidueBase
• GetKeywordIndex() : CHARMMData , GromacsData
• GetKineticEnergy() : Simulation
• GetKurtosis() : StatBase , StatAccumulator< MAX_MOMENT, DATATYPE >
• GetLastDate() : MMCifInfoRevisions
• GetLastMajor() : MMCifInfoRevisions
• GetLastMinor() : MMCifInfoRevisions
• GetLastNonGap() : SequenceImpl , ConstSequenceHandle , SequenceHandle
• GetLength() : AlignmentHandle , BondHandle , ConnectorImpl , AlignedRegion , SequenceImpl , ConstSequenceHandle , SequenceHandle
• GetLHS() : LogicOPNode
• GetLimit() : GaussianHighPassFilter , LowPassFilter , HighPassFilter , GaussianLowPassFilter , FermiLowPassFilter , FermiHighPassFilter , ButterworthLowPassFilter
• GetLine() : LineIterator
• GetListSize() : Observable
• GetLJ() : Forcefield
• GetLJPairIndex() : Topology
• GetLJPairIndices() : Topology
• GetLJPairParameters() : Topology
• GetLJPairs() : Topology
• GetLocalRot() : ConnectorImpl
• GetLocalScores() : lDDTScorer
• GetLog() : StringLogSink
• GetLogicalExtent() : FrequencyDomain , ImageStateBase , HalfFrequencyDomain , ImageStateImpl< T, D > , SpatialDomain
• GetMajor() : MMCifInfoRevisions
• GetMappedRMSD() : _CachedRMSD
• GetMass() : EntityImpl , EntityHandle , MMCifInfoStructDetails , AtomBase , ChainHandle , ChainView , EntityView , AtomImpl , ChainImpl , ResidueImpl , BuildingBlock , Forcefield , Topology , ResidueHandle , ResidueView
• GetMasses() : Topology , BuildingBlock
• GetMassMethod() : MMCifInfoStructDetails
• GetMaster() : AlignedRegion
• GetMatchingBackboneViews() : AlignmentHandle
• GetMatrix() : Transform , MMCifInfoTransOp
• GetMax() : AlignedCuboid , Distances
• GetMaxAdjustedDistance() : ClashingDistances
• GetMaximum() : IPL , PNG , ImageFormatBase , StatBase , StatAccumulator< MAX_MOMENT, DATATYPE > , StatMinMaxBase , RangeHandler , ImageFormatBase , DAT , DF3 , IPL , TIF , DAT , DF3 , PNG , TIF
• GetMaximumPosition() : StatBase , StatMinMaxBase
• GetMaxLength() : SequenceListImpl , ConstSequenceList , SequenceList
• GetMaxWeight() : SubstWeightMatrix
• GetMean() : StatBase , StatAccumulator< MAX_MOMENT, DATATYPE >
• GetMembraneAxis() : FindMemParam
• GetMessage() : QueryError
• GetMethod() : MMCifInfo
• GetMethodDetails() : MMCifInfoBioUnit
• GetMin() : AlignedCuboid , Distances
• GetMinDistance() : CoordFrame
• GetMinDistBetwCenterOfMassAndView() : CoordFrame
• GetMinimum() : PNG , ImageFormatBase , StatAccumulator< MAX_MOMENT, DATATYPE > , StatBase , StatMinMaxBase , RangeHandler , ImageFormatBase , DAT , DF3 , IPL , TIF , DAT , DF3 , IPL , PNG , TIF
• GetMinimumPosition() : StatMinMaxBase , StatBase
• GetMinLength() : SequenceListImpl , ConstSequenceList , SequenceList
• GetMinMax() : EntityView
• GetMinor() : MMCifInfoRevisions
• GetMinWeight() : SubstWeightMatrix
• GetMMCifEntityIdTr() : MMCifInfo
• GetMMCifPDBChainTr() : MMCifInfo
• GetMode() : EditorBase
• GetModelDetails() : MMCifInfoStructDetails
• GetModelDistance() : ClashEvent
• GetModelTypeDetails() : MMCifInfoStructDetails
• GetModificationDate() : Compound
• GetMoment() : StatAccumulator< MAX_MOMENT, DATATYPE >
• GetName() : Prop , OpBase , AndOp , OrOp , AlgorithmBase , StarDataItem , AtomBase , ChainBase , EntityBase , AtomImpl , EntityImpl , ResidueImpl , TorsionImpl , ResidueBase , TorsionHandle , SequenceImpl , SequenceHandle , QSscoreEntity , Table , ConstSequenceHandle , ChainImpl , XorOp , Compound
• GetNames() : Interaction , ProfileDB
• GetNext() : ChainHandle , ChainImpl , ResidueHandle
• GetNextLine() : LineIterator
• GetNode() : Polygon2
• GetNodeCount() : Polygon2
• GetNormal() : Plane
• GetNormalizeOnSave() : DAT , DX , DAT , PNG , MRC , TIF , IPL , Spider , PNG , Spider , DF3 , MRC , Situs , DF3 , DX , Situs , TIF
• GetNormStdDev() : Distances
• GetNTerModifier() : Forcefield
• GetNullModel() : ProfileHandle
• GetNum() : MMCifInfoRevisions , ResNum
• GetNumAddRules() : GromacsBlockModifier
• GetNumber() : ResidueImpl , ResidueBase
• getNumBodies() : DensityForce
• GetNumCMaps() : Topology
• GetNumConservedContacts() : lDDTScorer
• GetNumDensityBodies() : Topology
• GetNumDistanceConstraints() : Topology
• GetNumElements() : LinearCharacterContainer , LinearPositionContainer
• GetNumExclusions() : Topology
• GetNumFGMDHBondAcceptors() : Topology
• GetNumFGMDHBondDonors() : Topology
• GetNumFreeResidues() : Domains
• GetNumHarmonicAngles() : Topology
• GetNumHarmonicBonds() : Topology
• GetNumHarmonicDistanceRestraints() : Topology
• GetNumHarmonicImpropers() : Topology
• GetNumHarmonicPositionRestraints() : Topology
• GetNumHydrogenRules() : GromacsHydrogenConstructor
• GetNumLJPairs() : Topology
• getNumParticles() : DensityForce
• GetNumParticles() : Topology
• GetNumPeriodicDihedrals() : Topology
• GetNumPeriodicImpropers() : Topology
• GetNumPositionConstraints() : Topology
• GetNumpyMatrix() : Table
• GetNumReplaceRules() : GromacsBlockModifier
• GetNumResidues() : LinearIndexer , Dist2Mean
• GetNumSamples() : StatAccumulator< MAX_MOMENT, DATATYPE >
• GetNumStructures() : Dist2Mean , DistanceMap
• GetNumTotalContacts() : lDDTScorer
• GetNumUreyBradleyAngles() : Topology
• GetOBCScaling() : Topology
• GetOBCScalings() : Topology
• GetObservedData() : DataObserver
• GetObsoleteInfo() : MMCifInfo
• GetOccupancy() : AtomBase , AtomImpl
• GetODRLine() : CoordFrame , Vec3List , CoordFrame
• GetODRPlane() : Vec3List , CoordFrame
• GetOffset() : SequenceImpl , SequenceHandle , ConstSequenceHandle
• GetOligoLDDTScorer() : QSscorer
• GetOmegaTorsion() : ResidueImpl , ResidueBase
• GetOneLetterCode() : ResidueBase , SequenceHandle , SequenceImpl , ConstSequenceHandle , ResidueImpl , AlignmentHandle , Compound
• GetOP() : LogicOPNode
• GetOperations() : MMCifInfoBioUnit , MMCifInfo
• GetOperationsIntervalList() : MMCifInfoBioUnit
• GetOperatorName() : CompositeMask
• GetOptimalPrefactors() : Table
• GetOrigin() : Line2 , Hyperbola2 , Rotation3 , Plane , Sphere , Ellipse2 , Line3
• GetOriginalPos() : AtomBase , BondHandle , Dihedral , ConnectorImpl , TorsionHandle
• GetOSTVersionUsed() : CompoundLib
• GetOther() : BondHandle
• getOwner() : DensityForceImpl
• GetP() : Plane
• GetPageFirst() : MMCifInfoCitation
• GetPageLast() : MMCifInfoCitation
• GetParam() : StereoChemicalParams , Interaction
• GetParent() : Node
• GetParm() : SelNode
• getParticleMass() : DensityForce
• GetPDBID() : MMCifInfoObsolete
• GetPDBMMCifChainTr() : MMCifInfo
• GetPeakList() : HighestPeakSearch3DBase
• GetPeriodicBoxExtents() : Simulation
• GetPeriodicDihedralIndices() : Topology
• GetPeriodicDihedralParameters() : Topology
• GetPeriodicDihedrals() : Topology
• GetPeriodicImproperIndices() : Topology
• GetPeriodicImproperParameters() : Topology
• GetPeriodicImpropers() : Topology
• GetPerResidueScores() : MappedLDDTScorer
• GetPhasecolor() : TIF
• GetPhi() : Rotation3
• GetPhiTorsion() : ResidueImpl , ResidueBase
• GetPhysicalExtent() : HalfFrequencyDomain , SpatialDomain , FrequencyDomain
• GetPixel() : RasterImage
• GetPixelSampling() : PixelSampling , ConstData
• GetPointCloud() : PointCloudManager
• GetPoints() : PointCloud
• GetPointWeight() : DSSPAccessibilityParam
• GetPos() : AtomBase , BondHandle , ConnectorImpl , TorsionHandle , ConstSequenceHandle , SequenceHandle , SequenceListImpl , Dihedral , SequenceImpl , AlignmentHandle
• GetPosition() : LinearPositionContainer
• GetPositionConstraints() : Topology
• GetPositions() : LinearPositionContainer , Simulation
• GetPotentialEnergy() : Simulation
• GetPrev() : ChainImpl , ResidueHandle , ChainHandle
• GetPrimaryConnector() : AtomImpl
• GetPrincipalAxes() : Vec3List
• GetProfile() : ProfileDB
• GetProgress() : Progress
• GetPropAsString() : ConstGenericPropContainer< H >
• GetPropList() : ConstGenericPropContainer< H > , GenericPropContainerImpl
• GetPropMap() : ConstGenericPropContainer< H > , GenericPropContainerImpl
• GetPsi() : Rotation3
• GetPsiTorsion() : ResidueImpl , ResidueBase
• GetPublishedIn() : MMCifInfoCitation
• GetPubMed() : MMCifInfoCitation
• GetQualifiedAtomName() : UniqueAtomIdentifier
• GetQualifiedName() : AtomImpl , ResidueImpl , AtomBase , ResidueBase
• GetQuat() : Rotation3
• GetQuery() : QueryViewWrapper
• GetQueryString() : Query , QueryError , QueryImpl
• GetRadius() : Circle2 , AtomImpl , Sphere , PointCloud , AtomBase
• GetRadiusSquare() : WithinParam
• GetRange() : QueryError , QueryToken
• GetReadSeqRes() : MMCifReader , PDBReader
• GetReal() : ImageHandle , ConstData , SpatialDomain , NullData , HalfFrequencyDomain , FrequencyDomain , ImageStateBase , ImageStateImpl< T, D > , ConstImageHandle
• GetRef() : WithinParam
• GetReferences() : lDDTScorer
• GetReplacedPDBID() : MMCifInfoObsolete
• GetReplaceRuleName() : GromacsBlockModifier
• GetReplaceRuleNewCharge() : GromacsBlockModifier
• GetReplaceRuleNewName() : GromacsBlockModifier
• GetReplaceRuleNewType() : GromacsBlockModifier
• GetResidue() : AtomImpl , ConstSequenceHandle , AtomHandle , AlignmentHandle , Diag , SequenceImpl , AlignedColumn , SequenceHandle , AtomView
• GetResidueAccessibility() : DSSPAccessibilityParam , NACCESSAccessibilityParam
• GetResidueByIndex() : ChainHandle , ChainView
• GetResidueCount() : ChainImpl , EntityHandle , ChainHandle , ChainView , EntityView , EntityImpl
• GetResidueIndex() : SequenceListImpl , SequenceImpl , AlignmentHandle , AlignedColumn , ChainView , ConstSequenceHandle , SequenceHandle
• GetResidueList() : ChainImpl , ChainHandle , EntityView , ChainView , ChainImpl , EntityHandle
• GetResidueName() : UniqueAtomIdentifier
• GetResidueRenamingCTer() : Forcefield
• GetResidueRenamingMain() : Forcefield
• GetResidueRenamingNTer() : Forcefield
• GetResidueRenamingTwoTer() : Forcefield
• GetResNum() : UniqueAtomIdentifier
• getResolution() : DensityForce
• GetResolution() : MMCifInfo
• GetRestrictChains() : MMCifReader
• GetRevisions() : MMCifInfo
• GetRFree() : MMCifInfo
• GetRHS() : LogicOPNode
• GetRingAtomCount() : RingFinder
• GetRingBondCount() : RingFinder
• GetRings() : RingFinder
• GetRMSD() : CoordFrame , TMAlignResult
• GetRole() : ConstSequenceHandle , SequenceHandle , SequenceImpl
• GetRootMeanSquare() : StatBase , StatAccumulator< MAX_MOMENT, DATATYPE >
• GetRot() : Transform
• GetRotationAngle() : Rotation3
• GetRotationAxis() : Rotation3
• GetRotationMatrix() : Rotation3
• GetRow() : Mat3
• GetRowCount() : AlignedColumn
• GetRWork() : MMCifInfo
• GetSampling() : ImageStateBase , ImageStateImpl< T, D >
• getScaling() : DensityForce
• GetScore() : ProfileColumn , ContactPredictionScoreResult
• GetSecond() : Dihedral , BondHandle , ConnectorImpl , TorsionHandle
• GetSecondaryConnectors() : AtomImpl
• GetSecondAtom() : StereoChemicalAngleViolation , StereoChemicalBondViolation , ClashEvent
• GetSecStructure() : ResidueBase , ResidueImpl
• GetSeqBegin() : MMCifInfoStructRefSeq
• GetSeqEnd() : MMCifInfoStructRefSeq
• GetSeqRes() : MMCifReader , PDBReader , MMCifReader
• GetSeqRNum() : MMCifInfoStructRefSeqDif
• GetSequence() : SequenceListImpl , AlignmentHandle , ProfileHandle , SequenceListImpl
• GetSequenceOffset() : AlignmentHandle
• GetSequenceRole() : AlignmentHandle
• GetSequences() : AlignmentHandle
• GetSequentialAtoms() : CRDReader , PQRReader , CRDReader
• GetShift() : FractionalShift
• GetSigma() : Topology
• GetSigmas() : Topology
• GetSigned() : TIF , DAT , TIF , DAT
• GetSize() : StarLoopDesc , AlignedCuboid , DistanceMap , TriMatrix< T > , StarLoopDesc , LineIterator , ConstData , ImageStateImpl< T, D > , MMCifInfoRevisions , Extent , MMCifInfoRevisions
• GetSkewness() : StatBase , StatAccumulator< MAX_MOMENT, DATATYPE >
• GetSlab() : Size
• GetSpatialOrigin() : SpatialDomain , ImageHandle , ImageStateBase , NullData , ImageStateImpl< T, D > , ConstData , HalfFrequencyDomain , FrequencyDomain , ConstImageHandle
• GetSpatialSampling() : ConstData , PixelSampling
• GetStandardDeviation() : StatAccumulator< MAX_MOMENT, DATATYPE > , StatBase
• GetStart() : Extent , Rectangle2 , AlignedRegion , ExtentIterator
• GetStartTime() : CoordSource , CoordGroupHandle
• GetState() : AtomImpl
• GetStatus() : MMCifInfoRevisions
• GetStdDev() : Distances
• GetStop() : ButterworthLowPassFilter
• GetStrictHydrogens() : RuleBasedProcessor
• GetString() : SequenceImpl , ConstSequenceHandle , SequenceHandle
• GetStringProp() : ConstGenericPropContainer< H >
• GetStringProperty() : AtomImpl , ResidueBase , ResidueImpl , AtomBase
• GetStructDetails() : MMCifInfo
• GetStructRefs() : MMCifInfo , MMCifReader , MMCifInfo , MMCifReader
• GetSubformat() : MRC
• GetSubimage() : Nanoscope , TIF , Nanoscope , TIF
• GetSum() : StatAccumulator< MAX_MOMENT, DATATYPE > , StatBase
• GetSuperposition() : _CachedRMSD
• GetT() : FermiLowPassFilter , FermiHighPassFilter
• GetTheta() : Rotation3
• GetThird() : TorsionHandle , Dihedral
• GetThirdAtom() : StereoChemicalAngleViolation
• GetTitle() : MMCifInfoCitation , MMCifInfoStructDetails , MMCifInfoCitation
• GetTMat() : FragmentImpl
• GetTMScore() : TMAlignResult
• GetTopology() : Simulation
• GetTorsionList() : ResidueHandle , ResidueImpl
• GetTorsionMap() : EntityImpl
• GetTraj() : TrajObserver
• GetTrans() : Transform
• GetTransform() : GDTResult , EntityImpl , EntityHandle , TMAlignResult
• GetTransformationMatrix() : EntityHandle
• GetTransposedMatrix() : Transform
• GetTri() : SurfaceHandle
• GetTriIDList() : SurfaceHandle , SurfaceImpl
• GetType() : MMCifInfoTransOp , ConstImageHandle , QueryToken , ImageStateImpl< T, D > , ConstData , Diag , ImageHandle , BuildingBlock , MMCifInfoTransOp , NullData , ChainBase , ChainImpl , ImageStateBase
• GetTypeName() : Prop
• GetTypes() : Interaction , BuildingBlock
• GetUnique() : Table
• GetUnkAtomTreatment() : RuleBasedProcessor
• GetUnkResidueTreatment() : RuleBasedProcessor
• GetUreyBradleyAngleIndices() : Topology
• GetUreyBradleyAngleParameters() : Topology
• GetUreyBradleyAngles() : Topology
• GetValue() : StarDataItem , Peak
• GetValueRange() : QueryToken
• GetVariance() : StatAccumulator< MAX_MOMENT, DATATYPE > , StatBase
• GetVdWRadius() : NACCESSAccessibilityParam , DSSPAccessibilityParam
• GetVec3Prop() : ConstGenericPropContainer< H >
• GetVecA() : Cuboid
• GetVecB() : Cuboid
• GetVecC() : Cuboid
• GetVector() : CuboidAxis , MMCifInfoTransOp
• GetVelocities() : Simulation
• GetVerbosityLevel() : Logger
• GetVertex() : SurfaceHandle
• GetVertexIDList() : SurfaceHandle , SurfaceImpl
• GetVol() : Size
• GetVolume() : MMCifInfoCitation , Size , Extent , MMCifInfoCitation , AlignedCuboid
• GetW() : Vec4
• GetWeight() : StatAccumulator< MAX_MOMENT, DATATYPE > , SubstWeightMatrix
• GetWeightedStdDev() : Distances
• GetWidth() : FormattedLine , Size , RasterImage , Extent , Rectangle2
• GetWriteMultiModel() : PDBWriter
• GetX() : Vec3 , Vec2 , Vec4
• GetXAxisRotation() : Transform
• GetY() : Vec3 , Vec2 , Vec4
• GetYAxisRotation() : Transform
• GetYear() : MMCifInfoCitation
• GetZ() : Vec3 , Vec4
• GetZAxisRotation() : Transform
• GetZeroOccTreatment() : Processor
• GetZeroOccupancy() : Checker
• glob_dist_list : lDDTScorer
• global_score() : QSscorer
• globalAA : CADResult
• Gly() : Builder
• gp_get() : ConstGenericPropContainer< H >
• GpImpl() : AtomBase , EntityBase , SequenceHandle , AtomBase , EntityBase , BondHandle , ResidueBase , BondHandle , ConstSequenceHandle , ResidueBase , ConstSequenceHandle , ChainBase , SequenceHandle , ChainBase
• GREY : RasterImage
• GromacsBlockModifier() : GromacsBlockModifier
• GromacsHydrogenConstructor() : GromacsHydrogenConstructor