- g -
- GenericProp()
: GenericPropContainerImpl
- GenericPropContainerImpl()
: GenericPropContainerImpl
- GenericPropError()
: GenericPropError
- GenProp()
: GenProp
- GeomException()
: GeomException
- Get()
: IOProfileRegistry
, EntityPropertyMapper
, IOProfileRegistry
, EntityPropertyMapper
, IterRange< I >
, MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
, EntityPropertyMapper
, MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
, TriMatrix< T >
, EntityPropertyMapper
- GetA()
: Ellipse2
, Hyperbola2
- GetAlignmentHandle()
: AlignedRegion
- GetAltAtomGroupNames()
: ResidueImpl
, ResidueHandle
- GetAltAtomPos()
: ResidueImpl
, ResidueHandle
- GetAltGroupNames()
: AtomBase
- GetAltPos()
: AtomBase
- GetAngle()
: Quat
, EntityHandle
, EntityView
, EntityImpl
, TorsionImpl
, TorsionHandle
- GetAngleICS()
: Dihedral
, EntityImpl
- GetAngleXCS()
: Dihedral
, EntityImpl
- GetAnisou()
: AtomBase
, AtomImpl
- GetArea()
: Rectangle2
, Polygon2
, Ellipse2
, Circle2
- GetAtom()
: FragmentImpl
- GetAtomCount()
: ResidueHandle
, ResidueView
, ChainHandle
, ChainView
, CoordGroupHandle
, CoordSource
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
- GetAtomList()
: ChainHandle
, CoordGroupHandle
, CoordSource
, EntityHandle
, EntityView
, ResidueImpl
, ResidueHandle
, ResidueView
- GetAtomPos()
: CoordGroupHandle
, CoordSource
- GetAtomProps()
: SelNode
- GetAtoms()
: NotConnectedError
- GetAtomSpecIndex()
: Compound
- GetAtomSpecs()
: Compound
- GetAttachedView()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetAttribute()
: InfoGroup
, InfoHandle
, EleImpl
, InfoItem
- GetAttributeList()
: InfoGroup
, InfoHandle
, EleImpl
, InfoItem
- GetAvailableAlignmentHandler()
: IOManager
- GetAvailableEntityHandler()
: IOManager
- GetAvailableSurfaceHandler()
: IOManager
- GetAverageBFactor()
: ResidueImpl
- GetAxis()
: Quat
- GetAxisA()
: Cuboid
- GetAxisB()
: Cuboid
- GetAxisC()
: Cuboid
- GetB()
: Ellipse2
, Hyperbola2
- GetBFactor()
: AtomBase
, AtomImpl
- GetBitDepth()
: DAT
, TIF
- GetBondCount()
: AtomHandle
, AtomView
, ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
- GetBondList()
: AtomHandle
, AtomView
, EntityHandle
, EntityView
, EntityImpl
- GetBondOrder()
: BondHandle
, ConnectorImpl
- GetBondPartners()
: AtomHandle
, AtomView
- GetBondSpecs()
: Compound
- GetBoolProp()
: ConstGenericPropContainer< H >
- GetBoolRepr()
: EleImpl
- GetBoundingBox()
: Polygon2
, Ellipse2
- GetBoundObject()
: QueryState
- GetBounds()
: ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetBucketCount()
: MultiClassifier< V, T1, T2, T3, T4, T5, T6, T7 >
- GetBucketSize()
: PackingStatistics
- GetBuilder()
: Conopology
- GetCAlphaCBetaPos()
: ReducedPotentialImpl
, ReducedPotential
- GetCategory()
: StarDataItem
, StarLoopDesc
, StarDataItem
, StarLoopDesc
- GetCenter()
: AlignedCuboid
, Circle2
, Cuboid
, PointCloud
, Vec3List
, WithinParam
, Transform
- GetCenterOfAtoms()
: ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetCenterOfMass()
: ChainHandle
, ChainView
, EntityHandle
, EntityView
, ChainImpl
, EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetCentralAtom()
: ResidueImpl
, ResidueHandle
- GetCentralNormal()
: ResidueImpl
, ResidueHandle
- GetCentroid()
: Polygon2
- GetChain()
: EntityImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetChainCount()
: EntityHandle
, EntityView
, EntityImpl
- GetChainIter()
: EntityImpl
- GetChainList()
: EntityHandle
, EntityView
, EntityImpl
- GetCharge()
: AtomBase
, AtomImpl
- GetChemClass()
: Compound
, ConnResEntry
, ResidueImpl
, ResidueBase
- GetCircumference()
: Circle2
- GetCol()
: Mat3
- GetCompOP()
: SelNode
- GetConnectorCount()
: AtomImpl
- GetCount()
: InteractionStatistics
, PackingStatistics
, ReducedStatistics
, TorsionStatisticsSolis
, TorsionStatistics
, AlignmentHandle
, SequenceListImpl
, ConstSequenceList
, SequenceList
- GetCoverage()
: AlignmentHandle
, SequenceListImpl
- GetCreationDate()
: Compound
- GetCurrentAltGroupName()
: ResidueImpl
, ResidueHandle
- GetCurrentSink()
: Logger
- GetCutoffDistance()
: PackingStatistics
- GetDefault()
: IOProfileRegistry
- GetDefaultGroup()
: InfoHandle
- GetDefaultItem()
: InfoHandle
- GetDefaultProps()
: AtomProp
- GetDeletions()
: InsDel
- GetDialect()
: Builder
, Compound
- GetDialectAsString()
: Compound
- GetDir()
: ConnectorImpl
- GetDirection()
: Line2
, Line3
- GetDistanceBucketSize()
: InteractionStatistics
- GetDocument()
: InfoImpl
- GetElement()
: EleImpl
, AtomBase
, AtomImpl
- GetEnd()
: Rectangle2
, AlignedRegion
- GetEndianess()
: DAT
- GetEndianessOnSave()
: MRC
, Spider
- GetEnergy()
: AllAtomPotential
, ReducedPotential
- GetEnergyCounts()
: AllAtomPotential
, PackingPotential
, TorsionPotentialSolis
, TorsionPotential
- GetEntity()
: AtomHandle
, AtomView
, ChainHandle
, ChainView
, CoordGroupHandle
, CoordSource
, AtomImpl
, ChainImpl
, ResidueImpl
, ResidueHandle
, ResidueView
- GetEntityView()
: QueryViewWrapper
- GetErrorDescription()
: QueryImpl
, Query
- GetExtent()
: CuboidAxis
- GetFirst()
: BondHandle
, ConnectorImpl
, Dihedral
, TorsionHandle
- GetFirstNonGap()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetFlags()
: QueryViewWrapper
- GetFloatProp()
: ConstGenericPropContainer< H >
- GetFloatProperty()
: AtomBase
, AtomImpl
, ResidueImpl
, ResidueBase
- GetFloatRepr()
: EleImpl
- GetFormat()
: TIF
- GetFormatDescription()
: ClustalIOHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOPDBHandler
, EntityIOSDFHandler
, FastaIOHandler
, MapIODatHandler
, DF3MapIOHandler
, MapIODm3Handler
, MapIODxHandler
, MapIOHandlerFactoryBase
, MapIOJpkHandler
, MapIOMrcHandler
, MapIONanoscopeHandler
, MapIOPngHandler
, MapIOSitusHandler
, MapIOSpiHandler
, MapIOTiffHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOPDBHandler
, EntityIOSDFHandler
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
, PirIOHandler
, PromodIOHandler
, ClustalIOHandler
, FastaIOHandler
, PirIOHandler
, PromodIOHandler
, SequenceIOHandlerFactoryBase
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
- GetFormatName()
: ClustalIOHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOPDBHandler
, EntityIOSDFHandler
, FastaIOHandler
, MapIODatHandler
, DF3MapIOHandler
, MapIODm3Handler
, MapIODxHandler
, MapIOHandlerFactoryBase
, MapIOJpkHandler
, MapIOMrcHandler
, MapIONanoscopeHandler
, MapIOPngHandler
, MapIOSitusHandler
, MapIOSpiHandler
, MapIOTiffHandler
, EntityIOCRDHandler
, EntityIOHandlerFactoryBase
, EntityIOMAEHandler
, EntityIOPDBHandler
, EntityIOSDFHandler
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
, PirIOHandler
, PromodIOHandler
, ClustalIOHandler
, FastaIOHandler
, PirIOHandler
, PromodIOHandler
, SequenceIOHandlerFactoryBase
, SurfaceIOHandlerFactoryBase
, SurfaceIOMSMSHandler
- GetFormatString()
: ImageFormatBase
- GetFormattedMessage()
: QueryError
- GetFormula()
: Compound
- GetFourth()
: Dihedral
, TorsionHandle
- GetFrame()
: CoordGroupHandle
, CoordSource
, InMemCoordSource
- GetFrameCount()
: CoordGroupHandle
, CoordSource
, InMemCoordSource
- GetFrequency()
: TorsionStatisticsSolis
- GetGamma()
: Ellipse2
, Hyperbola2
- GetGaplessString()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetGroup()
: InfoGroup
, InfoHandle
- GetGroups()
: InfoGroup
- GetHalfExtent()
: CuboidAxis
- GetHalfExtents()
: Cuboid
- GetHandle()
: AtomHandle
, AtomView
, ChainHandle
, ChainView
, EntityHandle
, EntityView
, ResidueHandle
, ResidueView
- GetHashCode()
: ResidueHandle
, AtomHandle
, AtomView
, BondHandle
- GetHeight()
: Rectangle2
- GetID()
: Compound
- GetImpl()
: ConstGenericPropContainer< H >
- GetIndex()
: ResidueView
, AtomImpl
, StarLoopDesc
, AtomBase
, ChainImpl
, ResidueImpl
, ResidueHandle
, AlignedColumn
- GetIndexForResNum()
: ChainImpl
- GetIndexOf()
: ContinuousClassifier
, IntegralClassifier
- GetInertia()
: Vec3List
- GetInsCode()
: ResNum
- GetInsertions()
: InsDel
- GetIntProp()
: ConstGenericPropContainer< H >
- GetIntProperty()
: ResidueImpl
, AtomBase
, AtomImpl
, ResidueBase
- GetIntRepr()
: EleImpl
- GetInvTransfMatrix()
: EntityImpl
- GetInvTransformationMatrix()
: EntityHandle
- GetItem()
: InfoGroup
, InfoHandle
- GetItems()
: InfoGroup
- GetKey()
: ResidueImpl
, ResidueBase
- GetLastNonGap()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetLength()
: AlignmentHandle
, BondHandle
, ConnectorImpl
, AlignedRegion
, SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetLHS()
: LogicOPNode
- GetList()
: InfoPath
- GetLocalRot()
: ConnectorImpl
- GetLowerCutoff()
: InteractionStatistics
- GetMass()
: ResidueImpl
, AtomBase
, ChainHandle
, ChainView
, EntityHandle
, EntityView
, AtomImpl
, ChainImpl
, EntityImpl
, ResidueHandle
, ResidueView
- GetMaster()
: AlignedRegion
- GetMatrix()
: Transform
- GetMax()
: AlignedCuboid
- GetMaxCounts()
: PackingStatistics
- GetMaximum()
: ImageFormatBase
- GetMaxLength()
: SequenceListImpl
, ConstSequenceList
, SequenceList
- GetMessage()
: QueryError
- GetMin()
: AlignedCuboid
- GetMinimum()
: ImageFormatBase
- GetMinLength()
: SequenceList
, SequenceListImpl
, ConstSequenceList
- GetMinMax()
: EntityView
- GetMode()
: EditorBase
- GetModificationDate()
: Compound
- GetName()
: SequenceHandle
, ResidueBase
, EntityImpl
, InfoSet
, InfoGroup
, InfoHandle
, EleImpl
, InfoItem
, StarDataItem
, AtomBase
, ChainBase
, EntityBase
, AtomImpl
, ChainImpl
, ResidueImpl
, TorsionImpl
, Prop
, TorsionHandle
, SequenceImpl
, ConstSequenceHandle
- GetNext()
: ConnResEntry
, ChainHandle
, ChainImpl
, ResidueHandle
- GetNode()
: Polygon2
- GetNodeCount()
: Polygon2
- GetNormal()
: Plane
- GetNormalizeOnSave()
: PNG
, DAT
, DF3
, DX
, MRC
, Situs
, Spider
, TIF
- GetNum()
: ResNum
- GetNumber()
: ResidueImpl
, ResidueBase
- GetNumberOfClasses()
: ClassifierBase
- GetOccupancy()
: AtomBase
, AtomImpl
- GetOffset()
: SequenceImpl
, ConstSequenceHandle
, SequenceHandle
- GetOmegaTorsion()
: ResidueImpl
, ResidueBase
- GetOneLetterCode()
: SequenceImpl
, Compound
, ResidueImpl
, ResidueBase
, AlignmentHandle
, ConnResEntry
, ConstSequenceHandle
, SequenceHandle
- GetOP()
: LogicOPNode
- GetOptions()
: PackingPotential
, ReducedPotential
, AllAtomPotential
, ReducedStatistics
- GetOrigin()
: Ellipse2
, Line3
, Sphere
, Line2
, Plane
, Hyperbola2
, Rotation3
- GetOriginalPos()
: AtomImpl
, ConnectorImpl
, Dihedral
, TorsionHandle
, BondHandle
, AtomBase
- GetOther()
: BondHandle
- GetP()
: Plane
- GetPackingEnergy()
: PackingPotential
- GetParent()
: InfoHandle
, InfoItem
, Node
, InfoGroup
, EleImpl
- GetParm()
: SelNode
- GetPath()
: InfoGroup
, EleImpl
- GetPhasecolor()
: TIF
- GetPhi()
: Rotation3
- GetPhiTorsion()
: ResidueBase
, ResidueImpl
- GetPointCloud()
: PointCloudManager
- GetPoints()
: PointCloud
- GetPos()
: ConnectorImpl
, SequenceImpl
, AlignmentHandle
, AtomImpl
, Dihedral
, AtomBase
, SequenceHandle
, SequenceListImpl
, ConstSequenceHandle
, BondHandle
, TorsionHandle
- GetPrev()
: ConnResEntry
, ChainHandle
, ChainImpl
, ResidueHandle
- GetPrimaryConnector()
: AtomImpl
- GetPrincipalAxes()
: Vec3List
- GetPropAsString()
: ConstGenericPropContainer< H >
- GetPropList()
: ConstGenericPropContainer< H >
, GenericPropContainerImpl
- GetPropMap()
: ConstGenericPropContainer< H >
, GenericPropContainerImpl
- GetPsi()
: Rotation3
- GetPsiTorsion()
: ResidueImpl
, ResidueBase
- GetQualifiedName()
: ResidueImpl
, ResidueBase
, AtomBase
, AtomImpl
- GetQuat()
: Rotation3
- GetQuery()
: QueryViewWrapper
- GetQueryString()
: QueryImpl
, Query
, QueryError
- GetRadius()
: Sphere
, AtomImpl
, PointCloud
, Circle2
, AtomBase
- GetRadiusSquare()
: WithinParam
- GetRange()
: QueryToken
, QueryError
- GetRef()
: WithinParam
- GetReqAtoms()
: ConnResEntry
- GetResidue()
: SequenceImpl
, AtomHandle
, AtomView
, AlignedColumn
, SequenceHandle
, AlignmentHandle
, ConstSequenceHandle
, AtomImpl
- GetResidueByIndex()
: ChainView
, ChainHandle
- GetResidueCount()
: ChainView
, EntityImpl
, EntityHandle
, EntityView
, ChainImpl
, ChainHandle
- GetResidueIndex()
: AlignmentHandle
, SequenceHandle
, ChainView
, SequenceListImpl
, ConstSequenceHandle
, AlignedColumn
, SequenceImpl
- GetResidueList()
: ChainHandle
, ChainView
, EntityView
, ChainImpl
, EntityHandle
, ChainImpl
- GetRHS()
: LogicOPNode
- GetRingAtomCount()
: RingFinder
- GetRingBondCount()
: RingFinder
- GetRings()
: RingFinder
- GetRoot()
: EleImpl
- GetRot()
: Transform
- GetRotationAngle()
: Rotation3
- GetRotationAxis()
: Rotation3
- GetRotationMatrix()
: Rotation3
- GetRow()
: Mat3
- GetRowCount()
: AlignedColumn
- GetSecond()
: TorsionHandle
, Dihedral
, BondHandle
, ConnectorImpl
- GetSecondaryConnectors()
: AtomImpl
- GetSecStructure()
: ResidueImpl
, ResidueBase
- GetSequence()
: SequenceListImpl
, AlignmentHandle
- GetSequenceOffset()
: AlignmentHandle
- GetSequences()
: AlignmentHandle
- GetSequenceSeparation()
: InteractionStatistics
- GetSequentialAtoms()
: CRDReader
- GetSigned()
: DAT
, TIF
- GetSize()
: StarLoopDesc
, TriMatrix< T >
, AlignedCuboid
- GetStart()
: AlignedRegion
, Rectangle2
- GetState()
: AtomImpl
- GetStrictHydrogenMode()
: Builder
- GetString()
: ConstSequenceHandle
, SequenceHandle
, SequenceImpl
- GetStringProp()
: ConstGenericPropContainer< H >
- GetStringProperty()
: AtomBase
, ResidueBase
, ResidueImpl
, AtomImpl
- GetStringRepr()
: EleImpl
- GetSub()
: EleImpl
- GetSubformat()
: MRC
- GetSubimage()
: Nanoscope
, TIF
- GetSubList()
: EleImpl
- GetSubs()
: EleImpl
- GetTextData()
: InfoHandle
, EleImpl
, InfoGroup
- GetTheta()
: Rotation3
- GetThird()
: TorsionHandle
, Dihedral
- GetTMat()
: FragmentImpl
- GetTorsionBucketCount()
: TorsionStatisticsSolis
- GetTorsionBucketCountCentral()
: TorsionStatistics
- GetTorsionBucketCountNext()
: TorsionStatistics
- GetTorsionBucketCountPrev()
: TorsionStatistics
- GetTorsionBucketSize()
: TorsionStatisticsSolis
- GetTorsionBucketSizeCentral()
: TorsionStatistics
- GetTorsionBucketSizeNext()
: TorsionStatistics
- GetTorsionBucketSizePrev()
: TorsionStatistics
- GetTorsionEnergy()
: TorsionPotential
- GetTorsionList()
: ConnResEntry
, ResidueImpl
, ResidueHandle
- GetTorsionMap()
: EntityImpl
- GetTotalCount()
: PackingStatistics
, ReducedStatistics
- GetTotalEnergy()
: PackingPotential
, ReducedPotential
, AllAtomPotential
, ReducedPotential
, TorsionPotentialSolis
, AllAtomPotential
, TorsionPotential
- GetTrans()
: Transform
- GetTransfMatrix()
: EntityImpl
- GetTransform()
: GDTResult
- GetTransformationMatrix()
: EntityHandle
- GetTransposedMatrix()
: Transform
- GetTri()
: SurfaceHandle
- GetTriIDList()
: SurfaceHandle
, SurfaceImpl
- GetType()
: QueryToken
, EleImpl
, InfoItem
- GetTypeName()
: Prop
- GetUpperCutoff()
: InteractionStatistics
- GetValue()
: StarDataItem
, InfoItem
- GetValueRange()
: QueryToken
- GetVecA()
: Cuboid
- GetVecB()
: Cuboid
- GetVecC()
: Cuboid
- GetVecRepr()
: EleImpl
- GetVector()
: CuboidAxis
- GetVerbosityLevel()
: Logger
- GetVertex()
: SurfaceHandle
- GetVertexIDList()
: SurfaceImpl
, SurfaceHandle
- GetW()
: Vec4
- GetWeight()
: SubstWeightMatrix
- GetWidth()
: Rectangle2
, FormattedLine
- GetWriteMultiModel()
: PDBWriter
- GetX()
: Vec4
, Vec3
, Vec2
- GetXAxisRotation()
: Transform
- GetY()
: Vec3
, Vec2
, Vec4
- GetYAxisRotation()
: Transform
- GetZ()
: Vec3
, Vec4
- GetZAxisRotation()
: Transform
- gp_get()
: ConstGenericPropContainer< H >
- GpImpl()
: ChainBase
, ConstSequenceHandle
, EntityBase
, ChainBase
, EntityBase
, SequenceHandle
, AtomBase
, ResidueBase
, AtomBase
, BondHandle
, SequenceHandle
, ConstSequenceHandle
, ResidueBase
, BondHandle
- GuessAtomElement()
: Builder
- GuessChemClass()
: Builder